Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Carbamoyl-phosphate synthetase, large subunit, ATP-binding

Term: IPR005479  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene76269 SustainPine v3.0 466
• AutoFact: SUMO-activating enzyme subunit 2 n=2 Tax=Arabidopsis thaliana RepID=F4IHI1_ARATH 7.0e-08
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative Ubiquitin activating enzyme 1.347e-08
Internal
sp_v3.0_unigene76803 SustainPine v3.0 397
• AutoFact: Translation elongation factor 1-alpha (Fragment) n=3 Tax=Saccharomycetales RepID=A9QAA2_9ASCO 0.0
• FL-Next: sp=Elongation factor 1-alpha; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Elongation factor 1-alpha 9.992e-33
Internal
sp_v3.0_unigene77081 SustainPine v3.0 288
• AutoFact: Pyruvate carboxylase n=4 Tax=Agaricales RepID=B0DI83_LACBS 4.2039e-45
• FL-Next: sp=Pyruvate carboxylase; (Phytophthora megasperma f. sp. glycines). 0.0
• Sma3: Precursor of carboxylase pyruvate carboxylase 5.097e-09
Internal
sp_v3.0_unigene77204 SustainPine v3.0 217
• AutoFact: Translation elongation factor 1A-like protein (Fragment) n=1 Tax=Reticulomyxa filosa RepID=B5A4Q1_RETFI 3.0e-26
• FL-Next: sp=Elongation factor 1-alpha; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Elongation factor-like 4.336e-32
Internal
sp_v3.0_unigene77920 SustainPine v3.0 254
• AutoFact: Delta-1-pyrroline-5-carboxylate dehydrogenase n=2 Tax=Triticeae RepID=Q3S832_TRITU 1.0e-19
• FL-Next: sp=Delta-1-pyrroline-5-carboxylate dehydrogenase 12A1, mitochondrial; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene78098 SustainPine v3.0 244
• AutoFact: Receptor protein kinase n=1 Tax=Pinus sylvestris RepID=Q9FEU2_PINSY 2.0e-27
• FL-Next: tr=Receptor protein kinase; Pinus sylvestris (Scots pine). 0.0
• Sma3: Receptor protein kinase CLAVATA1, putative 1.551e-24
Internal
sp_v3.0_unigene78523 SustainPine v3.0 181
• AutoFact: Plastid/chloroplast ribosomal protein L24 n=1 Tax=Volvox carteri f. nagariensis RepID=D8U0H3_VOLCA 4.0e-13
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: CL24 1.354e-12
Putative C-terminus
sp_v3.0_unigene79239 SustainPine v3.0 284
• AutoFact: translation elongation factor-1 alpha [Pseudotsuga menziesii var. menziesii] gb|AAV92326.1| translation elongation factor-1 alpha [Pseudotsuga menziesii var. menziesii] gb|AAV92327.1| translation elongation factor-1 alpha [Pseudotsuga menziesii var. menzi 3.0e-26
• FL-Next: sp=Elongation factor 1-alpha; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Elongation factor 1-alpha 5.299e-36
Misassembled
sp_v3.0_unigene79574 SustainPine v3.0 203
• AutoFact: Reverse transcriptase (Fragment) n=1 Tax=Ginkgo biloba RepID=O82684_GINBI 4.0e-20
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Reverse transcriptase 0.0
Putative C-terminus
sp_v3.0_unigene79939 SustainPine v3.0 121
• AutoFact: Elongation factor 1-alpha n=1 Tax=Seculamonas ecuadoriensis RepID=C1K9U6_9EUKA 3.0e-09
• FL-Next: sp=Elongation factor 1-alpha; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Elongation factor 1-alpha 7.44e-17
Internal
sp_v3.0_unigene80177 SustainPine v3.0 194
• AutoFact: translation elongation factor-1 alpha [Picea abies] 3.0e-12
• FL-Next: sp=Elongation factor 1-alpha; Euglena gracilis. 0.0
• Sma3: Elongation factor 1-alpha 1.313e-33
Internal
sp_v3.0_unigene80231 SustainPine v3.0 208
• AutoFact: Translation elongation factor 1-alpha (Fragment) n=3 Tax=Hypocreales RepID=A4U9K0_9HYPO 5.0e-27
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Elongation factor 1-alpha 0.0
Internal
sp_v3.0_unigene81351 SustainPine v3.0 194
• AutoFact: Elongation factor 1-alpha (Fragment) n=1 Tax=Spirogyra sp. FWAC125 RepID=A6MWT3_9VIRI 7.0e-23
• FL-Next: sp=Elongation factor 1-alpha; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Elongation factor 1-alpha 3.39e-31
Internal
sp_v3.0_unigene81513 SustainPine v3.0 148
• AutoFact: Elongation factor 1-alpha (Fragment) n=38 Tax=Microbotryaceae RepID=Q0MX41_9BASI 2.0e-20
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Elongation factor 1-alpha 7.132e-31
Putative N-terminus
sp_v3.0_unigene81708 SustainPine v3.0 211
• AutoFact: Polyprotein n=2 Tax=Primula vulgaris RepID=A5X2S4_9ERIC 2.0e-14
• FL-Next: tr=Polyprotein; Primula vulgaris. 0.0
Internal
sp_v3.0_unigene93869 SustainPine v3.0 1180
• AutoFact: Nodulin MtN3-like protein [Arabidopsis thaliana] sp|Q8L9J7.1|SWET1_ARATH RecName: Full=Bidirectional sugar transporter SWEET1; Short=AtSWEET1 gb|AAM65929.1| unknown [Arabidopsis thaliana] gb|AAO42204.1| unknown protein [Arabidopsis thaliana] gb|AAO63896.1 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Seven-transmembrane-domain protein 1 1.016e-20
Complete
sp_v3.0_unigene93946 SustainPine v3.0 782
• AutoFact: Alpha-expansin 7, putative n=1 Tax=Ricinus communis RepID=B9RBZ3_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Expansin 0.0
C-terminus
sp_v3.0_unigene96264 SustainPine v3.0 583
• AutoFact: LRR receptor-like serine/threonine-protein kinase RCH1 n=2 Tax=Arabidopsis RepID=RCH1_ARATH 2.0e-38
• FL-Next: tr=Receptor protein kinase; Pinus sylvestris (Scots pine). 0.0
Internal
sp_v3.0_unigene97805 SustainPine v3.0 462
• AutoFact: Expansin n=6 Tax=Pinaceae RepID=Q9SWY1_PINTA 1.4013e-45
• FL-Next: tr=Expansin; Pinus taeda (Loblolly pine). 0.0
• Sma3: Expansin 0.0
N-terminus
sp_v3.0_unigene97932 SustainPine v3.0 559
• AutoFact: putative leucine-rich repeat receptor-like protein kinase [Arabidopsis thaliana] sp|Q9FII5.1|TDR_ARATH RecName: Full=Leucine-rich repeat receptor-like protein kinase TDR; AltName: Full=Protein PHLOEM INTERCALATED WITH XYLEM; AltName: Full=Tracheary elemen 6.0e-29
• FL-Next: tr=Clavata-like receptor; Picea glauca (White spruce) (Pinus glauca). 0.0
• Sma3: Receptor protein kinase CLAVATA1, putative 8.35e-29
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain