Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Ribosomal protein S12/S23

Term: IPR006032  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene126557 SustainPine v3.0 717
AutoFact: Ethylene-responsive transcription factor ERF018 n=1 Tax=Arabidopsis thaliana RepID=ERF18_ARATH 3.0e-24
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: AP2/ERF domain-containing transcription factor 4.463e-27
Putative Complete
sp_v3.0_unigene126693 SustainPine v3.0 446
AutoFact: AP2/ERF domain-containing transcription factor n=1 Tax=Populus trichocarpa RepID=B9IKF6_POPTR 5.0e-24
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: AP2/ERF domain-containing transcription factor 1.497e-27
N-terminus
sp_v3.0_unigene126718 SustainPine v3.0 486
AutoFact: AP2/ERF domain-containing transcription factor n=1 Tax=Populus trichocarpa RepID=A9PLA3_POPTR 5.0e-25
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: RAP2-like protein 1.561e-27
N-terminus
sp_v3.0_unigene129315 SustainPine v3.0 449
AutoFact: Transcriptional factor TINY, putative n=1 Tax=Ricinus communis RepID=B9RQZ6_RICCO 5.0e-26
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: AP2/ERF domain-containing transcription factor 1.19601e-41
N-terminus
sp_v3.0_unigene130304 SustainPine v3.0 409
AutoFact: chaperonin 20 [Arabidopsis thaliana] ref|NP_851045.1| chaperonin 20 [Arabidopsis thaliana] ref|NP_001190350.1| chaperonin 20 [Arabidopsis thaliana] ref|XP_002871956.1| hypothetical protein ARALYDRAFT_488978 [Arabidopsis lyrata subsp. lyrata] sp|O65282.2|C 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative 20 kDa chaperonin, chloroplast 1.869e-08
Internal
sp_v3.0_unigene132035 SustainPine v3.0 568
AutoFact: UDP-xylose phenolic glycosyltransferase [Solanum lycopersicum] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: UDP-glucosyltransferase, putative 1.323e-32
C-terminus
sp_v3.0_unigene135515 SustainPine v3.0 435
AutoFact: ethylene-responsive transcription factor ERF017 [Arabidopsis thaliana] sp|Q84QC2.1|ERF17_ARATH RecName: Full=Ethylene-responsive transcription factor ERF017 gb|AAP06820.1| putative AP2 domain transcription factor [Arabidopsis thaliana] gb|AEE29818.1| ethy 1.0e-14
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: RAP2-like protein 1.341e-27
N-terminus
sp_v3.0_unigene135642 SustainPine v3.0 267
AutoFact: LRR_4 domain containing protein 2.0e-05
Sma3: Leucine Rich Repeat family protein 4.231e-14
unknown
sp_v3.0_unigene138217 SustainPine v3.0 132
AutoFact: 30S ribosomal protein S12, chloroplastic n=40 Tax=Coniferales RepID=RR12_PINTH 2.0e-11
FL-Next: sp=30S ribosomal protein S12, chloroplastic; Pinus amamiana. Plastid; Chloroplast. 0.0
Sma3: Ribosomal protein S12 1.91e-11
N-terminus
sp_v3.0_unigene140739 SustainPine v3.0 385
AutoFact: AP2/ERF domain-containing transcription factor n=1 Tax=Populus trichocarpa RepID=A9PLA1_POPTR 5.0e-16
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: AP2 domain transcription factor-like 1.176e-17
N-terminus
sp_v3.0_unigene142216 SustainPine v3.0 436
AutoFact: Dehydration-responsive element binding protein 3 n=1 Tax=Glycine max RepID=Q2VEU3_SOYBN 3.0e-22
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: RAP2-like protein 2.713e-27
N-terminus
sp_v3.0_unigene142616 SustainPine v3.0 250
AutoFact: AP2/ERF domain-containing transcription factor n=1 Tax=Populus trichocarpa RepID=A9PLA4_POPTR 6.0e-17
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: RAP2-like protein 1.426e-13
Putative N-terminus
sp_v3.0_unigene142766 SustainPine v3.0 316
AutoFact: RecName: Full=40S ribosomal protein S23; AltName: Full=S12 gb|AAA79921.1| putative 40S ribosomal protein s12 [Fragaria x ananassa] 3.0e-24
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 40S ribosomal protein S23 4.785e-14
N-terminus
sp_v3.0_unigene142985 SustainPine v3.0 373
AutoFact: AP2/ERF domain-containing transcription factor n=1 Tax=Populus trichocarpa RepID=A9PLA4_POPTR 2.0e-21
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: AP2/ERF domain-containing transcription factor 6.65e-28
N-terminus
sp_v3.0_unigene144375 SustainPine v3.0 419
AutoFact: RecName: Full=40S ribosomal protein S23; AltName: Full=S12 gb|AAA79921.1| putative 40S ribosomal protein s12 [Fragaria x ananassa] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 40S ribosomal protein S23 2.129e-10
Putative Complete
sp_v3.0_unigene149248 SustainPine v3.0 188
AutoFact: Ethylene-responsive transcription factor ERF017 n=2 Tax=Arabidopsis RepID=ERF17_ARATH 8.0e-14
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: RAP2-like protein 1.523e-16
Putative N-terminus
sp_v3.0_unigene150146 SustainPine v3.0 376
AutoFact: 30S ribosomal protein S12 n=12 Tax=Alphaproteobacteria RepID=RS12_CAUSK 0.0
FL-Next: sp=30S ribosomal protein S12, chloroplastic; Keteleeria davidiana (David's keteleeria) (Pseudotsuga davidiana). Plastid; Chloroplast. 0.0
Sma3: 30S ribosomal protein S12, chloroplastic 0.0
Complete
sp_v3.0_unigene150184 SustainPine v3.0 175
AutoFact: 40S ribosomal protein S23 n=1 Tax=Ciona intestinalis RepID=RS23_CIOIN 4.0e-17
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 40S ribosomal protein S23 1.718e-10
Internal
sp_v3.0_unigene150374 SustainPine v3.0 112
AutoFact: Ribosomal protein S23, putative n=2 Tax=Sarcocystidae RepID=B9PHL8_TOXGO 1.0e-11
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 40S ribosomal protein S23 2.507e-07
Putative C-terminus
sp_v3.0_unigene150654 SustainPine v3.0 437
AutoFact: 40S ribosomal protein S23 n=1 Tax=Trichinella spiralis RepID=E5S4A3_TRISP 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 40S ribosomal protein S23 1.691e-10
Putative Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain