Sustainpine_db
HomeAssembliesBLASTSearchInstitutions

Assembly Name: SustainPine v3.0

Name: Ribosomal protein S12/S23

Term: IPR006032  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene17588 SustainPine v3.0 3089
• AutoFact: ROP binding protein kinase 2 [Arabidopsis thaliana] sp|Q8RXC8.1|RBK2_ARATH RecName: Full=Receptor-like cytosolic serine/threonine-protein kinase RBK2; AltName: Full=Protein ROP BINDING PROTEIN KINASES 2 gb|AAL91229.1| putative serine/threonine protein kin 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: ATP binding protein, putative 3.067e-14
Complete
sp_v3.0_unigene18082 SustainPine v3.0 2298
• AutoFact: GYF domain-containing protein [Arabidopsis thaliana] dbj|BAB09197.1| unnamed protein product [Arabidopsis thaliana] gb|AED94891.1| GYF domain-containing protein [Arabidopsis thaliana] 0.0
• FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
• Sma3: Gb|AAC80623.1 9.26e-06
C-terminus
sp_v3.0_unigene18246 SustainPine v3.0 1121
• AutoFact: RecName: Full=40S ribosomal protein S23; AltName: Full=S12 gb|AAA79921.1| putative 40S ribosomal protein s12 [Fragaria x ananassa] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene18541 SustainPine v3.0 945
• AutoFact: RecName: Full=40S ribosomal protein S23; AltName: Full=S12 gb|AAA79921.1| putative 40S ribosomal protein s12 [Fragaria x ananassa] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene18752 SustainPine v3.0 832
• AutoFact: Transcription factor (Fragment) n=1 Tax=Lycoris longituba RepID=D6MK34_9ASPA 8.0e-26
• FL-Next: tr=Transcription factor AP2; Taxus cuspidata (Japanese yew). 0.0
• Sma3: AP2/ERF domain-containing transcription factor 6.043e-34
C-terminus
sp_v3.0_unigene18917 SustainPine v3.0 1023
• AutoFact: ferric-chelate reductase [Pisum sativum] gb|AAU94356.1| iron reductase [Pisum sativum] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ferric-chelate reductase, putative 2.215e-17
Putative N-terminus
sp_v3.0_unigene20619 SustainPine v3.0 1045
• AutoFact: RecName: Full=40S ribosomal protein S23; AltName: Full=S12 gb|AAA79921.1| putative 40S ribosomal protein s12 [Fragaria x ananassa] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene20776 SustainPine v3.0 732
• AutoFact: putative protein kinase [Oryza sativa Japonica Group] 3.00004e-41
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: ATP binding protein, putative 2.157e-10
Internal
sp_v3.0_unigene22865 SustainPine v3.0 828
• AutoFact: AP2/ERF domain-containing transcription factor n=1 Tax=Populus trichocarpa RepID=A9PLA3_POPTR 7.0e-31
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: RAP2-like protein 2.87e-15
Putative Complete
sp_v3.0_unigene23829 SustainPine v3.0 697
• AutoFact: GYF domain-containing protein [Arabidopsis thaliana] dbj|BAB09197.1| unnamed protein product [Arabidopsis thaliana] gb|AED94891.1| GYF domain-containing protein [Arabidopsis thaliana] 1.99993e-41
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
N-terminus
sp_v3.0_unigene23988 SustainPine v3.0 2896
• AutoFact: auxin response factor 6 [Arabidopsis thaliana] sp|Q9ZTX8.2|ARFF_ARATH RecName: Full=Auxin response factor 6 gb|AAT67072.1| ARF6 [Arabidopsis thaliana] gb|AEE31207.1| auxin response factor 6 [Arabidopsis thaliana] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Auxin response factor, putative 2.562e-34
C-terminus
sp_v3.0_unigene24510 SustainPine v3.0 4728
• AutoFact: [RTKL] COG0515 Serine/threonine protein kinase 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Mitogen activated protein kinase kinase kinase 3, mapkkk3, mekk3, putative 3.169e-13
Complete
sp_v3.0_unigene24801 SustainPine v3.0 312
• AutoFact: Putative AP2 domain-containing transcription factor (Fragment) n=1 Tax=Musa acuminata RepID=B5RHW0_MUSAC 4.0e-15
• FL-Next: tr=Transcription factor AP2; Taxus cuspidata (Japanese yew). 0.0
• Sma3: AP2/ERF domain-containing transcription factor 8.294e-24
Internal
sp_v3.0_unigene24963 SustainPine v3.0 385
• AutoFact: Ethylene-responsive transcription factor ERF017 n=2 Tax=Arabidopsis RepID=ERF17_ARATH 3.0e-20
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: AP2/ERF domain-containing transcription factor 5.95706e-41
N-terminus
sp_v3.0_unigene25351 SustainPine v3.0 543
• AutoFact: 30S ribosomal protein S12 n=2 Tax=Pyrenophora RepID=B2WGH1_PYRTR 0.0
• FL-Next: sp=30S ribosomal protein S12, chloroplastic; Keteleeria davidiana (David's keteleeria) (Pseudotsuga davidiana). Plastid; Chloroplast. 0.0
• Sma3: Ribosomal protein S12 0.0
Putative Complete
sp_v3.0_unigene25555 SustainPine v3.0 1079
• AutoFact: Dehydration-responsive element binding protein 3 n=1 Tax=Glycine max RepID=Q2VEU3_SOYBN 4.0e-28
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: AP2/ERF domain-containing transcription factor 8.051e-27
Complete
sp_v3.0_unigene28016 SustainPine v3.0 525
• AutoFact: 30S ribosomal protein S12 n=5 Tax=Flavobacteriales RepID=C7M4E1_CAPOD 0.0
• FL-Next: sp=30S ribosomal protein S12, chloroplastic; Keteleeria davidiana (David's keteleeria) (Pseudotsuga davidiana). Plastid; Chloroplast. 0.0
• Sma3: 30S ribosomal protein S12, chloroplastic 0.0
Complete
sp_v3.0_unigene28206 SustainPine v3.0 974
• AutoFact: AP2 domain containing protein 5.0e-13
• FL-Next: sp=Ethylene-responsive transcription factor ERF039; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: AP2/ERF domain-containing transcription factor 6.612e-31
Complete
sp_v3.0_unigene28757 SustainPine v3.0 1612
• AutoFact: peptide-O-fucosyltransferase [Arabidopsis thaliana] gb|AAO22598.1| unknown protein [Arabidopsis thaliana] gb|AEE29566.1| peptide-O-fucosyltransferase [Arabidopsis thaliana] 0.0
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
• Sma3: GDP-fucose protein-O-fucosyltransferase 2 7.054e-10
C-terminus
sp_v3.0_unigene28845 SustainPine v3.0 1489
• AutoFact: putative mitogen-activated protein kinase 1 [Medicago sativa] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Mitogen activated protein kinase kinase kinase 3, mapkkk3, mekk3, putative 2.814e-13
Internal

Go to Annotations List

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain