Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: B3 DNA binding domain

Term: IPR003340  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene9813 SustainPine v3.0 1168
AutoFact: B3 domain-containing transcription factor FUS3 n=2 Tax=Arabidopsis RepID=FUS3_ARATH 2.0e-35
FL-Next: tr=Transcription factor viviparous 1; Picea abies (Norway spruce) (Picea excelsa). 0.0
Sma3: VP1/ABI3-like protein 1.869e-08
Putative C-terminus
sp_v3.0_unigene10002 SustainPine v3.0 1614
AutoFact: Qa-SNARE, Sso1/Syntaxin1-type, SYP12A-group n=1 Tax=Physcomitrella patens subsp. patens RepID=A9SNS7_PHYPA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Qa-SNARE, Sso1/Syntaxin1-type, SYP12A-group 2.825e-21
Complete
sp_v3.0_unigene10615 SustainPine v3.0 2544
AutoFact: Glycosyltransferase family-37 n=2 Tax=Populus RepID=B9HI99_POPTR 0.0
FL-Next: sp=Galactoside 2-alpha-L-fucosyltransferase; Pisum sativum (Garden pea). 0.0
Sma3: Galactoside 2-alpha-L-fucosyltransferase, putative 3.786e-32
Complete
sp_v3.0_unigene11430 SustainPine v3.0 828
AutoFact: Putative auxin response factor 5/7 (Fragment) n=1 Tax=Gnetum gnemon RepID=E1UHX8_GNEGN 5.0e-21
FL-Next: Isoform 2 of Auxin response factor 19 OS=Oryza sativa subsp. japonica GN=ARF19 0.0
Sma3: Auxin response factor 2 1.716e-07
Internal
sp_v3.0_unigene12264 SustainPine v3.0 1664
AutoFact: AP2/B3 domain-containing transcription factor [Arabidopsis thaliana] sp|Q1G3M3.1|Y3918_ARATH RecName: Full=B3 domain-containing protein At3g19184 gb|ABF59230.1| unknown protein [Arabidopsis thaliana] dbj|BAH30459.1| hypothetical protein [Arabidopsis thali 4.06377e-44
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene12324 SustainPine v3.0 4347
AutoFact: auxin response factor 3 [Cucumis sativus] 0.0
FL-Next: tr=Putative auxin response factor 3/4; Pinus pinaster (Maritime pine). 0.0
Sma3: Auxin response factor, putative 6.80891e-42
Complete
sp_v3.0_unigene13444 SustainPine v3.0 1987
AutoFact: DUF1771 domain containing protein 2.0e-11
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Complete
sp_v3.0_unigene13790 SustainPine v3.0 935
AutoFact: DNA binding protein Rav [Capsicum annuum] 1.0e-35
FL-Next: tr=APETALA2-related transcription factor 1; Picea abies (Norway spruce) (Picea excelsa). 0.0
Sma3: Putative AP2 domain containing protein RAP2.8 8.198e-08
Internal
sp_v3.0_unigene13963 SustainPine v3.0 1166
AutoFact: Putative auxin response factor 6 n=1 Tax=Amborella trichopoda RepID=E0WD84_AMBTC 0.0
FL-Next: tr=Putative auxin response factor 3/4; Pinus pinaster (Maritime pine). 0.0
Sma3: Auxin response factor, putative 3.37601e-41
Misassembled
sp_v3.0_unigene16106 SustainPine v3.0 895
AutoFact: pfam02362, B3, B3 DNA binding domain 3.0e-19
FL-Next: tr=VP1/ABI3-like protein; Callitropsis nootkatensis. 0.0
Sma3: ABI3-like factor 2.56e-14
Putative C-terminus
sp_v3.0_unigene18078 SustainPine v3.0 3303
AutoFact: ARF-L2 protein (Fragment) n=1 Tax=Ginkgo biloba RepID=D4HTT9_GINBI 0.0
FL-Next: tr=Putative auxin response factor 3/4; Pinus pinaster (Maritime pine). 0.0
Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene23272 SustainPine v3.0 937
AutoFact: AP2/B3 domain-containing transcription factor [Arabidopsis thaliana] sp|Q1G3M3.1|Y3918_ARATH RecName: Full=B3 domain-containing protein At3g19184 gb|ABF59230.1| unknown protein [Arabidopsis thaliana] dbj|BAH30459.1| hypothetical protein [Arabidopsis thali 8.99998e-41
FL-Next: sp=B3 domain-containing protein Os05g0481400; Oryza sativa subsp. japonica (Rice). 0.0
N-terminus
sp_v3.0_unigene23988 SustainPine v3.0 2896
AutoFact: auxin response factor 6 [Arabidopsis thaliana] sp|Q9ZTX8.2|ARFF_ARATH RecName: Full=Auxin response factor 6 gb|AAT67072.1| ARF6 [Arabidopsis thaliana] gb|AEE31207.1| auxin response factor 6 [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Auxin response factor, putative 2.562e-34
C-terminus
sp_v3.0_unigene27316 SustainPine v3.0 1092
AutoFact: Auxin response factor n=1 Tax=Dimocarpus longan RepID=D0EZH0_9ROSI 1.0e-36
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Auxin response factor 1 7.431e-14
N-terminus
sp_v3.0_unigene34155 SustainPine v3.0 1883
AutoFact: putative RAV2-like DNA-binding protein [Arabidopsis thaliana] 0.0
FL-Next: tr=APETALA2-like protein 2; Pinus thunbergii (Japanese black pine) (Pinus thunbergiana). 0.0
Sma3: Putative AP2 domain containing protein RAP2.8 5.668e-08
Complete
sp_v3.0_unigene37402 SustainPine v3.0 489
AutoFact: AUX/IAA protein; Transcriptional factor B3; Auxin response factor [Medicago truncatula] 4.0e-14
FL-Next: tr=Putative auxin response factor 3/4; Pinus pinaster (Maritime pine). 0.0
N-terminus
sp_v3.0_unigene37518 SustainPine v3.0 1036
AutoFact: auxin response factor 5 [Cucumis sativus] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Auxin response factor, putative 3.16497e-41
Internal
sp_v3.0_unigene40101 SustainPine v3.0 1497
AutoFact: Putative auxin response factor 5/7 (Fragment) n=1 Tax=Gnetum gnemon RepID=E1UHX8_GNEGN 0.0
FL-Next: tr=Putative auxin response factor 3/4; Pinus pinaster (Maritime pine). 0.0
Sma3: Auxin response factor, putative 6.34e-07
Internal
sp_v3.0_unigene41217 SustainPine v3.0 3576
AutoFact: auxin response factor-like protein [Mangifera indica] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Auxin response factor, putative 4.904e-28
Complete
sp_v3.0_unigene44657 SustainPine v3.0 537
AutoFact: B3 DNA binding domain, putative [Oryza sativa Japonica Group] 2.0e-17
FL-Next: sp=B3 domain-containing protein Os11g0197600; Oryza sativa subsp. japonica (Rice). 0.0
Sma3: Putative uncharacterized protein P0022F10.16 3.411e-06
Putative C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain