Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Transcription factor TFIIB

Term: IPR000812  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene78115 SustainPine v3.0 309
AutoFact: Hexokinase-6 n=4 Tax=Poaceae RepID=HXK6_ORYSJ 3.0e-27
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Hexokinase 4.84849e-43
Internal
sp_v3.0_unigene80762 SustainPine v3.0 206
AutoFact: Kinase, putative n=1 Tax=Ricinus communis RepID=B9SPH6_RICCO 6.0e-20
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Chromosome undetermined scaffold_302, whole genome shotgun sequence 1.615e-13
Internal
sp_v3.0_unigene93767 SustainPine v3.0 2097
AutoFact: cysteine-rich receptor-like protein kinase 29 [Arabidopsis thaliana] sp|Q8S9L6.1|CRK29_ARATH RecName: Full=Cysteine-rich receptor-like protein kinase 29; Short=Cysteine-rich RLK29; Flags: Precursor gb|AAL75897.1| AT4g21410/T6K22_140 [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Chromosome undetermined scaffold_278, whole genome shotgun sequence 5.648e-15
Complete
sp_v3.0_unigene94340 SustainPine v3.0 785
AutoFact: Receptor protein kinase, putative [Solanum bulbocastanum] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Chromosome chr19 scaffold_4, whole genome shotgun sequence 1.966e-15
Internal
sp_v3.0_unigene105749 SustainPine v3.0 381
AutoFact: Transcription factor IIB n=3 Tax=Solanoideae RepID=B9VXZ5_CAPAN 3.0e-25
FL-Next: tr=Putative uncharacterized protein; Capsicum frutescens (Cayenne pepper) (Tabasco pepper). 0.0
Sma3: TFIIB-related protein 6.635e-09
Internal
sp_v3.0_unigene107667 SustainPine v3.0 160
AutoFact: Unassigned protein 3.0e-15
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene110045 SustainPine v3.0 292
AutoFact: TFIIB-related protein (Fragment) n=2 Tax=Andropogoneae RepID=Q93WQ2_MAIZE 1.0e-36
FL-Next: tr=TFIIB-related protein, putative, expressed; Oryza sativa subsp. japonica (Rice). 0.0
Sma3: TFIIB-related protein 3.176e-13
Putative N-terminus
sp_v3.0_unigene110631 SustainPine v3.0 211
AutoFact: transcription factor IIB (ISS) [Ostreococcus tauri] emb|CAL56498.1| transcription factor IIB (ISS) [Ostreococcus tauri] 4.0e-18
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene119857 SustainPine v3.0 412
AutoFact: receptor-like protein kinase homolog RK20-1 [Phaseolus vulgaris] 1.0e-38
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Chromosome undetermined scaffold_302, whole genome shotgun sequence 5.701e-11
Internal
sp_v3.0_unigene121257 SustainPine v3.0 443
AutoFact: receptor protein kinase, putative [Arabidopsis thaliana] 6.0e-40
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Chromosome undetermined scaffold_302, whole genome shotgun sequence 4.861e-11
Internal
sp_v3.0_unigene127679 SustainPine v3.0 781
AutoFact: RecName: Full=Transcription initiation factor IIB; AltName: Full=General transcription factor TFIIB gb|AAB09756.1| transcription factor TFIIB [Glycine max] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Transcription initiation factor iib, putative 6.241e-12
C-terminus
sp_v3.0_unigene127748 SustainPine v3.0 295
AutoFact: Hexokinase n=1 Tax=Citrus sinensis RepID=Q9FVD3_CITSI 5.0e-18
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Hexokinase-2 7.35e-11
C-terminus
sp_v3.0_unigene127932 SustainPine v3.0 1147
AutoFact: Transcription initiation factor IIB n=7 Tax=Poaceae RepID=TF2B_ORYSJ 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Transcription initiation factor iib, putative 1.301e-11
C-terminus
sp_v3.0_unigene189389 SustainPine v3.0 870
AutoFact: AT-hook motif nuclear localized protein 2 n=2 Tax=Oryza sativa RepID=A1A6F0_ORYSJ 4.0e-27
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: AT-hook protein 1 3.216e-18
Putative C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain