Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: SWIB/MDM2 domain

Term: IPR003121  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene2504 SustainPine v3.0 2351
AutoFact: SWI/SNF complex component SNF12 homolog n=2 Tax=Arabidopsis RepID=SNF12_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: SWI/SNF transcription activation complex subunit 4.502e-14
Complete
sp_v3.0_unigene5603 SustainPine v3.0 1282
AutoFact: SWIB complex BAF60b domain-containing protein [Arabidopsis thaliana] gb|AAL24145.1| unknown protein [Arabidopsis thaliana] gb|AAM14205.1| unknown protein [Arabidopsis thaliana] gb|AEE84600.1| SWIB complex BAF60b domain-containing protein [Arabidopsis thal 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene12370 SustainPine v3.0 4956
AutoFact: Plus-3 multi-domain protein 7.0e-23
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene17582 SustainPine v3.0 2016
AutoFact: Upstream activation factor subunit UAF30, putative n=1 Tax=Ricinus communis RepID=B9S8L0_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene17905 SustainPine v3.0 1133
AutoFact: SWIb domain-containing protein [Solanum chacoense] 9.0e-26
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene18837 SustainPine v3.0 816
AutoFact: SWI/SNF complex component SNF12-like protein [Arabidopsis thaliana] sp|Q9FMT4.1|SNF12_ARATH RecName: Full=SWI/SNF complex component SNF12 homolog dbj|BAB08296.1| unnamed protein product [Arabidopsis thaliana] gb|AAL38282.1| unknown protein [Arabidopsis th 0.0
FL-Next: sp=SWI/SNF complex component SNF12 homolog; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: SWI/SNF transcription activation complex subunit 4.502e-14
C-terminus
sp_v3.0_unigene20659 SustainPine v3.0 468
AutoFact: SWIb domain-containing protein [Solanum chacoense] 6.0e-20
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene20795 SustainPine v3.0 581
AutoFact: Upstream activation factor subunit UAF30, putative n=1 Tax=Ricinus communis RepID=B9S8L0_RICCO 1.0e-26
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: SWIB/MDM2 domain containing protein 1.817e-09
C-terminus
sp_v3.0_unigene23264 SustainPine v3.0 342
unknown
sp_v3.0_unigene26644 SustainPine v3.0 649
AutoFact: PHD finger, SWIB/MDM2 and GYF domain-containing protein [Arabidopsis thaliana] gb|AAK43905.1|AF370586_1 Unknown protein [Arabidopsis thaliana] gb|AEC06725.1| PHD finger, SWIB/MDM2 and GYF domain-containing protein [Arabidopsis thaliana] 5.0e-14
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene30119 SustainPine v3.0 972
AutoFact: SWIb domain-containing protein [Solanum chacoense] 2.0e-22
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: SWIb domain-containing protein 6.753e-08
Complete
sp_v3.0_unigene30859 SustainPine v3.0 1099
AutoFact: SWIB/MDM2 domain-containing protein [Arabidopsis thaliana] ref|NP_001119064.1| SWIB/MDM2 domain-containing protein [Arabidopsis thaliana] emb|CAB36527.1| putative protein [Arabidopsis thaliana] emb|CAB79536.1| putative protein [Arabidopsis thaliana] gb|AA 9.0e-23
FL-Next: tr=At4g26810; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: SWIb domain-containing protein 2.167e-13
Complete
sp_v3.0_unigene33461 SustainPine v3.0 886
AutoFact: SWIb domain-containing protein [Solanum chacoense] 1.0e-21
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: SWIb domain-containing protein 7.629e-08
Complete
sp_v3.0_unigene35048 SustainPine v3.0 728
AutoFact: Upstream activation factor subunit UAF30, putative n=1 Tax=Ricinus communis RepID=B9S8L0_RICCO 2.0e-26
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: SWIB/MDM2 domain containing protein 1.54e-09
C-terminus
sp_v3.0_unigene35592 SustainPine v3.0 577
AutoFact: SWIb domain-containing protein [Solanum chacoense] 2.0e-26
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative uncharacterized protein 0.0
C-terminus
sp_v3.0_unigene38929 SustainPine v3.0 944
AutoFact: SWIB/MDM2 domain-containing protein [Arabidopsis thaliana] gb|AAF03473.1|AC009327_12 hypothetical protein [Arabidopsis thaliana] dbj|BAC42418.1| unknown protein [Arabidopsis thaliana] gb|AAO39929.1| At3g03590 [Arabidopsis thaliana] gb|AEE73960.1| SWIB/MDM 2.0e-19
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative uncharacterized protein At2g35605/T20F21.29 7.797e-06
Complete
sp_v3.0_unigene41711 SustainPine v3.0 1710
AutoFact: Upstream activation factor subunit UAF30, putative n=1 Tax=Ricinus communis RepID=B9S8L0_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene51037 SustainPine v3.0 134
AutoFact: Unassigned protein
FL-Next: sp=SWI/SNF complex component SNF12 homolog; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Os04g0382100 protein 4.873e-06
Internal
sp_v3.0_unigene52032 SustainPine v3.0 371
AutoFact: Nuclear receptor binding set domain containing protein 1, nsd, putative n=1 Tax=Ricinus communis RepID=B9T6E1_RICCO 2.0e-20
FL-Next: sp=Zinc finger CCCH domain-containing protein 19; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene68135 SustainPine v3.0 177
AutoFact: SWIB/MDM2 domain-containing protein [Arabidopsis thaliana] gb|AAK44049.1|AF370234_1 unknown protein [Arabidopsis thaliana] gb|AAL15230.1| unknown protein [Arabidopsis thaliana] gb|AAM15040.1| Expressed protein [Arabidopsis thaliana] gb|AAM15113.1| Express 8.0e-09
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative uncharacterized protein At2g35605/T20F21.29 3.899e-06
Putative C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain