Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Peptidase C12, ubiquitin carboxyl-terminal hydrolase 1

Term: IPR001578  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene59937 SustainPine v3.0 360
• AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q9SY02.1|PP301_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g02750 gb|AAD15348.1| hypothetical protein [Arabidopsis thaliana] emb|CAB77760.1| hypothetical protein 7.0e-39
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Pentatricopeptide repeat-containing protein, putative 1.033e-10
Internal
sp_v3.0_unigene60089 SustainPine v3.0 380
• AutoFact: Tetratricopeptide-like helical [Medicago truncatula] 2.0e-37
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Pentatricopeptide, putative, expressed 9.097e-15
Internal
sp_v3.0_unigene60415 SustainPine v3.0 435
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Pentatricopeptide repeat-containing protein, putative 6.709e-14
Internal
sp_v3.0_unigene60703 SustainPine v3.0 390
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Pentatricopeptide repeat-containing protein, putative 2.299e-17
Internal
sp_v3.0_unigene61056 SustainPine v3.0 361
• AutoFact: PREDICTED: similar to Tetratricopeptide-like helical n=1 Tax=Vitis vinifera RepID=UPI0001984A05 1.0e-33
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Pentatricopeptide repeat-containing protein, putative 6.187e-16
N-terminus
sp_v3.0_unigene61240 SustainPine v3.0 317
• AutoFact: DUF659 domain containing protein 3.0e-32
• FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Internal
sp_v3.0_unigene61315 SustainPine v3.0 303
• AutoFact: PREDICTED: similar to Tetratricopeptide-like helical n=1 Tax=Vitis vinifera RepID=UPI0001984A05 3.0e-26
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Pentatricopeptide, putative 6.296e-10
Putative N-terminus
sp_v3.0_unigene61612 SustainPine v3.0 263
• AutoFact: DUF659 domain containing protein 6.0e-12
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Internal
sp_v3.0_unigene61693 SustainPine v3.0 252
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative pentatricopeptide (PPR) repeat-containing protein 1.123e-11
Internal
sp_v3.0_unigene61771 SustainPine v3.0 293
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Pentatricopeptide repeat-containing protein, putative 8.356e-20
Internal
sp_v3.0_unigene61940 SustainPine v3.0 272
• AutoFact: DUF659 domain containing protein 6.0e-30
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Internal
sp_v3.0_unigene61965 SustainPine v3.0 339
• AutoFact: DUF659 domain containing protein 5.0e-23
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
C-terminus
sp_v3.0_unigene62276 SustainPine v3.0 270
• AutoFact: ubiquitin carboxyl-terminal hydrolase-like protein [Arabidopsis thaliana] gb|AAF24818.1|AC007592_11 F12K11.21 [Arabidopsis thaliana] gb|AAU84676.1| At1g06440 [Arabidopsis thaliana] gb|AAX22272.1| At1g06440 [Arabidopsis thaliana] dbj|BAF00518.1| hypothetic 5.0e-17
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Putative C-terminus
sp_v3.0_unigene62288 SustainPine v3.0 146
• AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] 5.0e-12
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene62451 SustainPine v3.0 198
• AutoFact: Pentatricopeptide repeat-containing protein n=1 Tax=Hordeum vulgare RepID=Q3LAF9_HORVU 2.0e-17
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Pentatricopeptide, putative 5.078e-10
Internal
sp_v3.0_unigene62703 SustainPine v3.0 203
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Pentatricopeptide repeat-containing protein, putative 8.094e-13
Internal
sp_v3.0_unigene62832 SustainPine v3.0 183
• AutoFact: DUF659 domain containing protein 8.0e-25
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Internal
sp_v3.0_unigene63040 SustainPine v3.0 243
• AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q9LND4.1|PPR14_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g06140, mitochondrial; Flags: Precursor gb|AAF80137.1|AC024174_19 Contains similarity to a hypothetical 5.0e-21
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Pentatricopeptide repeat-containing protein, putative 2.108e-14
Internal
sp_v3.0_unigene63077 SustainPine v3.0 237
• AutoFact: DUF659 domain containing protein 3.0e-34
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Internal
sp_v3.0_unigene63120 SustainPine v3.0 190
• AutoFact: Ankyrin; Pentatricopeptide repeat [Medicago truncatula] 4.0e-17
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: EMB2261 putative 1.658e-09
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain