Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Ribosomal protein L7Ae/L30e/S12e/Gadd45

Term: IPR004038  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene27337 SustainPine v3.0 441
AutoFact: ribosomal protein [Pteris vittata] 3.9937e-43
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 60S ribosomal protein L30 1.603e-21
Complete
sp_v3.0_unigene27379 SustainPine v3.0 525
AutoFact: 40S ribosomal protein S12 n=1 Tax=Nematostella vectensis RepID=A7SK96_NEMVE 0.0
FL-Next: sp=40S ribosomal protein S12; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 40S ribosomal protein S12 0.0
Complete
sp_v3.0_unigene27808 SustainPine v3.0 545
AutoFact: 40S ribosomal protein S12 n=1 Tax=Nematostella vectensis RepID=A7SK96_NEMVE 0.0
FL-Next: sp=40S ribosomal protein S12; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 40S ribosomal protein S12 0.0
Complete
sp_v3.0_unigene27862 SustainPine v3.0 515
AutoFact: Ribosomal protein L7Ae/L30e/S12e/Gadd4, putative n=1 Tax=Phytophthora infestans T30-4 RepID=D0P0D1_PHYIT 7.0e-19
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: H/ACA ribonucleoprotein complex subunit 2 4.621e-08
Complete
sp_v3.0_unigene29946 SustainPine v3.0 1365
AutoFact: ribosomal protein L7Ae-like [Brassica rapa] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene30026 SustainPine v3.0 1185
AutoFact: 60S ribosomal protein L30 n=1 Tax=Wolffia arrhiza RepID=D1MI90_WOLAR 8.96831e-44
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene30751 SustainPine v3.0 564
AutoFact: PREDICTED: similar to 40S ribosomal protein S12 n=1 Tax=Strongylocentrotus purpuratus RepID=UPI00005852D8 0.0
FL-Next: sp=40S ribosomal protein S12; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 40S ribosomal protein S12 0.0
Complete
sp_v3.0_unigene30792 SustainPine v3.0 770
AutoFact: 40S ribosomal protein S12 n=4 Tax=Picea sitchensis RepID=A9NQ79_PICSI 0.0
FL-Next: sp=40S ribosomal protein S12; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 40S ribosomal protein S12 0.0
Putative Complete
sp_v3.0_unigene30909 SustainPine v3.0 633
AutoFact: 40S ribosomal protein S12 n=1 Tax=Capsaspora owczarzaki ATCC 30864 RepID=E9C3J8_9EUKA 2.0e-40
FL-Next: sp=40S ribosomal protein S12; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 40S ribosomal protein S12 0.0
Complete
sp_v3.0_unigene31051 SustainPine v3.0 483
AutoFact: Ribosomal protein rpl30 n=4 Tax=Protostomia RepID=A8UGA5_EURCO 1.4013e-45
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 60S ribosomal protein L30 1.12e-17
Complete
sp_v3.0_unigene31219 SustainPine v3.0 517
AutoFact: Ribosomal protein rpl30 n=4 Tax=Protostomia RepID=A8UGA5_EURCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 60S ribosomal protein L30 1.12e-17
Complete
sp_v3.0_unigene31395 SustainPine v3.0 641
AutoFact: 40S ribosomal protein S12 n=1 Tax=Pinctada maxima RepID=C6JUN0_PINMA 0.0
FL-Next: sp=40S ribosomal protein S12; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 40S ribosomal protein S12 0.0
Complete
sp_v3.0_unigene31488 SustainPine v3.0 386
AutoFact: Ribosomal protein L7Ae containing protein n=1 Tax=Tetrahymena thermophila RepID=UPI00006D0064 2.0e-19
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 60S ribosomal protein L7a, putative 9.548e-09
N-terminus
sp_v3.0_unigene31566 SustainPine v3.0 488
AutoFact: Chain A, Structure Of A Human Prp31-15.5k-U4 Snrna Complex pdb|2OZB|D Chain D, Structure Of A Human Prp31-15.5k-U4 Snrna Complex 5.0e-39
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: NHP2-like protein 1 3.279e-08
Complete
sp_v3.0_unigene31976 SustainPine v3.0 453
AutoFact: 60S ribosomal protein L30 [Aedes aegypti] ref|XP_001650519.1| 60S ribosomal protein L30 [Aedes aegypti] ref|XP_001650520.1| 60S ribosomal protein L30 [Aedes aegypti] gb|ABF18292.1| 60S ribosomal protein L30 [Aedes aegypti] gb|EAT43318.1| 60S ribosomal pro 3.9937e-43
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 60S ribosomal protein L30 1.354e-21
Complete
sp_v3.0_unigene32006 SustainPine v3.0 358
AutoFact: PREDICTED: similar to ribosomal protein L30 isoform 1 n=2 Tax=Ciona intestinalis RepID=UPI00006A67A4 3.0e-38
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 60S ribosomal protein L30 1.354e-21
Complete
sp_v3.0_unigene32468 SustainPine v3.0 555
AutoFact: 40S ribosomal protein S12 n=1 Tax=Novocrania anomala RepID=B2YHX1_9BILA 2.0e-38
FL-Next: sp=40S ribosomal protein S12; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 40S ribosomal protein S12 0.0
Complete
sp_v3.0_unigene32712 SustainPine v3.0 533
AutoFact: ribosomal protein L30 [Argopecten irradians] 5.60519e-45
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Predicted protein 0.0
Complete
sp_v3.0_unigene33039 SustainPine v3.0 554
AutoFact: 40S ribosomal protein S12 n=1 Tax=Perinereis aibuhitensis RepID=Q86PL3_PERAI 1.0e-38
FL-Next: sp=40S ribosomal protein S12; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 40S ribosomal protein S12 0.0
Complete
sp_v3.0_unigene34901 SustainPine v3.0 436
AutoFact: 60S ribosomal protein l7a [Oryza sativa Indica Group] 2.94273e-44
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 60S ribosomal protein L7a, putative 1.42e-08
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain