Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: lignin biosynthetic process

Term: GO:0009809  Help

Source: GO from Sma3

Ontology: Biological Process


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene52815 SustainPine v3.0 452
AutoFact: Putative sinapyl alcohol dehydrogenase (Fragment) n=1 Tax=Pinus banksiana RepID=E5F5P1_PINBN 8.0e-33
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Cinnamyl alcohol dehydrogenase 0.0
C-terminus
sp_v3.0_unigene53002 SustainPine v3.0 196
AutoFact: Caffeate O-methyltransferase (Fragment) n=5 Tax=Pinus taeda RepID=Q5IDC8_PINTA 2.0e-25
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Caffeic acid 3-O-methyltransferase 3.36312e-44
Internal
sp_v3.0_unigene53130 SustainPine v3.0 300
AutoFact: NAC domain containing protein 35 [Arabidopsis thaliana] gb|AAC78526.2| NAM (no apical meristem)-like protein [Arabidopsis thaliana] gb|AEC05582.1| NAC domain containing protein 35 [Arabidopsis thaliana] 1.0e-13
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: NAC domain protein, IPR003441 0.0
Internal
sp_v3.0_unigene53354 SustainPine v3.0 411
AutoFact: Laccase n=2 Tax=Pinus taeda RepID=Q9AUI3_PINTA 4.0e-39
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Laccase 0.0
C-terminus
sp_v3.0_unigene54605 SustainPine v3.0 235
AutoFact: Cinnamyl alcohol dehydrogenase-like protein n=2 Tax=Populus RepID=B9IIG5_POPTR 7.0e-18
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Cinnamyl alcohol dehydrogenase-like protein 4.843e-22
Putative C-terminus
sp_v3.0_unigene55377 SustainPine v3.0 398
AutoFact: S-adenosylmethionine synthase (Fragment) n=2 Tax=core eudicotyledons RepID=Q42169_ARATH 0.0
FL-Next: sp=S-adenosylmethionine synthase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: S-adenosylmethionine synthetase 8.33e-32
N-terminus
sp_v3.0_unigene55430 SustainPine v3.0 414
AutoFact: Laccase n=3 Tax=Pinus RepID=F4MKL7_PINPS 4.0e-24
FL-Next: tr=Laccase; Pinus taeda (Loblolly pine). 0.0
Sma3: Laccase, putative 2.464e-28
C-terminus
sp_v3.0_unigene57204 SustainPine v3.0 322
AutoFact: S-adenosylmethionine synthase 2 n=1 Tax=Dianthus caryophyllus RepID=METK2_DIACA 2.0e-20
FL-Next: sp=S-adenosylmethionine synthase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: S-adenosylmethionine synthetase 2.226e-34
Internal
sp_v3.0_unigene57434 SustainPine v3.0 413
AutoFact: NAC domain containing protein 20 [Arabidopsis thaliana] dbj|BAD44041.1| hypothetical protein [Arabidopsis thaliana] gb|AEE33081.1| NAC domain containing protein 20 [Arabidopsis thaliana] 3.0e-18
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: NAC domain protein, IPR003441 0.0
Putative N-terminus
sp_v3.0_unigene58285 SustainPine v3.0 412
AutoFact: Laccase n=1 Tax=Pinus taeda RepID=Q9AUI2_PINTA 0.0
FL-Next: tr=Laccase; Pinus taeda (Loblolly pine). 0.0
Sma3: Laccase, putative 0.0
Internal
sp_v3.0_unigene60171 SustainPine v3.0 283
AutoFact: S-adenosylmethionine synthetase (Fragment) n=1 Tax=Dendrobium hybrid cultivar RepID=A4GKJ0_9ASPA 6.0e-33
FL-Next: sp=S-adenosylmethionine synthase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Methionine S-adenosyl transferase 2.635e-35
Internal
sp_v3.0_unigene60219 SustainPine v3.0 330
AutoFact: RecName: Full=S-adenosylmethionine synthase 2; Short=AdoMet synthase 2; AltName: Full=Methionine adenosyltransferase 2; Short=MAT 2 gb|AAG17036.1|AF187821_1 S-adenosylmethionine synthetase [Pinus contorta] 7.0e-15
FL-Next: sp=S-adenosylmethionine synthase 3; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: S-adenosylmethionine synthetase 1.747e-31
N-terminus
sp_v3.0_unigene60555 SustainPine v3.0 327
AutoFact: [R] COG3979 Uncharacterized protein contain chitin-binding domain type 3 6.0e-05
FL-Next: tr=LP6; Pinus taeda (Loblolly pine). 0.0
Sma3: Chitinase-like protein 2.004e-07
Putative N-terminus
sp_v3.0_unigene61004 SustainPine v3.0 301
AutoFact: Caffeoyl-CoA-O-methyltransferase (Fragment) n=12 Tax=Pinus RepID=A4FT66_PINPS 1.0e-29
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Caffeoyl-CoA O-methyltransferase 0.0
N-terminus
sp_v3.0_unigene61303 SustainPine v3.0 208
AutoFact: S-adenosyl methionine synthetase 2 (Fragment) n=10 Tax=Pinaceae RepID=Q5EK82_PINTA 4.0e-13
FL-Next: sp=S-adenosylmethionine synthase 1; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: S-adenosylmethionine synthetase 1.83e-23
C-terminus
sp_v3.0_unigene61632 SustainPine v3.0 210
AutoFact: S-adenosylmethionine synthase n=1 Tax=Physcomitrella patens subsp. patens RepID=A9TJH4_PHYPA 5.0e-22
FL-Next: sp=S-adenosylmethionine synthase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: S-adenosylmethionine synthetase 3.06e-19
Internal
sp_v3.0_unigene62006 SustainPine v3.0 320
AutoFact: Laccase-like multicopper oxidase 130 (Fragment) n=1 Tax=Ginkgo biloba RepID=Q693D1_GINBI 3.0e-35
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Laccase 7.00649e-45
Internal
sp_v3.0_unigene62969 SustainPine v3.0 314
AutoFact: ribosomal protein L2 [Glycine max] 5.0e-21
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: S-adenosylmethionine synthetase 6.944e-28
Internal
sp_v3.0_unigene63152 SustainPine v3.0 189
AutoFact: S-adenosylmethionine synthase 1 n=24 Tax=Tracheophyta RepID=METK1_VITVI 2.0e-15
FL-Next: sp=S-adenosylmethionine synthase 1; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: S-adenosylmethionine synthetase 2.982e-34
Putative N-terminus
sp_v3.0_unigene63433 SustainPine v3.0 233
AutoFact: Cytochrome P450 750A1 n=1 Tax=Pinus taeda RepID=C75A1_PINTA 3.0e-25
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Flavonoid 3'-hydroxylase 1.432e-19
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain