Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Actin-binding, cofilin/tropomyosin type

Term: IPR002108  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene126970 SustainPine v3.0 1147
AutoFact: actin depolymerizing factor 7 [Arabidopsis thaliana] sp|Q67ZM4.1|ADF7_ARATH RecName: Full=Actin-depolymerizing factor 7; Short=ADF-7; Short=AtADF7 dbj|BAD43856.1| actin depolymerizing factor - like protein [Arabidopsis thaliana] gb|AEE85080.1| actin depol 4.2039e-45
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene127904 SustainPine v3.0 504
AutoFact: Actin depolymerizing factor (Fragment) n=27 Tax=Pinaceae RepID=C6FCS5_PSEMZ 4.0e-22
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Actin-depolymerizing factor 2.886e-24
C-terminus
sp_v3.0_unigene130915 SustainPine v3.0 443
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene133064 SustainPine v3.0 304
AutoFact: Actin-depolymerizing factor n=2 Tax=Vitis vinifera RepID=ADF_VITVI 1.0e-05
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene135951 SustainPine v3.0 402
AutoFact: Actin-depolymerizing factor 2 n=8 Tax=Poaceae RepID=ADF2_ORYSJ 5.0e-08
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative Complete
sp_v3.0_unigene136033 SustainPine v3.0 256
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene143435 SustainPine v3.0 909
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Misassembled
sp_v3.0_unigene144288 SustainPine v3.0 336
AutoFact: actin depolymerizing factor 8 [Arabidopsis thaliana] sp|Q570Y6.2|ADF8_ARATH RecName: Full=Actin-depolymerizing factor 8; Short=ADF-8; Short=AtADF8 gb|AAM63658.1| putative actin-depolymerizing factor [Arabidopsis thaliana] gb|ABD60702.1| At4g00680 [Arabido 2.0e-20
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Actin-depolymerizing factor 2.766e-27
N-terminus
sp_v3.0_unigene144372 SustainPine v3.0 279
AutoFact: Actin-depolymerizing factor 6 n=6 Tax=Poaceae RepID=ADF6_ORYSJ 9.0e-28
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Actin-depolymerizing factor 1.399e-30
Internal
sp_v3.0_unigene150268 SustainPine v3.0 305
AutoFact: Cofilin n=1 Tax=Naegleria gruberi RepID=D2W2U0_NAEGR 1.0e-24
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene150549 SustainPine v3.0 422
AutoFact: Actophorin n=1 Tax=Acanthamoeba castellanii RepID=ACTP_ACACA 6.0e-34
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Actin depolymerizing factor, putative 4.267e-08
Putative Complete
sp_v3.0_unigene152237 SustainPine v3.0 505
AutoFact: Actophorin n=1 Tax=Acanthamoeba castellanii RepID=ACTP_ACACA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Actin-depolymerizing factor 1.143e-10
Complete
sp_v3.0_unigene160521 SustainPine v3.0 449
AutoFact: Cofilin n=1 Tax=Yarrowia lipolytica CLIB122 RepID=COFI_YARLI 7.0e-29
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative Complete
sp_v3.0_unigene183221 SustainPine v3.0 603
AutoFact: pfam00241, Cofilin_ADF, Cofilin/tropomyosin-type actin-binding protein 2.0e-39
FL-Next: sp=Actin-depolymerizing factor 6; Oryza sativa subsp. japonica (Rice). 0.0
Complete
sp_v3.0_unigene186066 SustainPine v3.0 286
AutoFact: pfam00241, Cofilin_ADF, Cofilin/tropomyosin-type actin-binding protein 3.0e-31
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene191269 SustainPine v3.0 499
AutoFact: pfam00241, Cofilin_ADF, Cofilin/tropomyosin-type actin-binding protein 4.0e-36
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene203402 SustainPine v3.0 464
AutoFact: pfam00241, Cofilin_ADF, Cofilin/tropomyosin-type actin-binding protein 9.94922e-44
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene204998 SustainPine v3.0 440
AutoFact: pfam00241, Cofilin_ADF, Cofilin/tropomyosin-type actin-binding protein 2.0e-40
FL-Next: tr=Predicted protein; Hordeum vulgare var. distichum (Two-rowed barley). 0.0
Sma3: cDNA clone:J023134C12, full insert sequence 6.823e-06
Complete
sp_v3.0_unigene206575 SustainPine v3.0 504
AutoFact: Actophorin n=1 Tax=Acanthamoeba castellanii RepID=ACTP_ACACA 0.0
FL-Next: sp=Actin-depolymerizing factor 6; Oryza sativa subsp. japonica (Rice). 0.0
Sma3: Actin-depolymerizing factor 6.018e-14
Complete
sp_v3.0_unigene206837 SustainPine v3.0 525
AutoFact: Actophorin n=1 Tax=Acanthamoeba castellanii RepID=ACTP_ACACA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Actin-depolymerizing factor 1.737e-24
Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain