Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Ribosomal protein L38e

Term: IPR002675  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene142600 SustainPine v3.0 754
AutoFact: Calreticulin n=2 Tax=Pinaceae RepID=Q9FYV2_PINTA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Calreticulin 0.0
N-terminus
sp_v3.0_unigene142900 SustainPine v3.0 466
AutoFact: calreticulin [Arabidopsis thaliana] 4.99997e-41
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Calreticulin 2.67648e-43
Misassembled
sp_v3.0_unigene143267 SustainPine v3.0 660
AutoFact: Calreticulin n=2 Tax=Pinaceae RepID=Q9FYV2_PINTA 0.0
FL-Next: tr=Calreticulin; Pinus taeda (Loblolly pine). 0.0
Sma3: Calreticulin 0.0
Putative N-terminus
sp_v3.0_unigene143936 SustainPine v3.0 856
AutoFact: Calreticulin domain containing protein 4.0e-31
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Calreticulin 8.40779e-45
Complete
sp_v3.0_unigene150556 SustainPine v3.0 254
AutoFact: 60S ribosomal protein L38 n=1 Tax=Salmo salar RepID=C0H7L4_SALSA 1.0e-10
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 60S ribosomal protein L38 5.618e-19
Putative Complete
sp_v3.0_unigene151043 SustainPine v3.0 308
AutoFact: 60S ribosomal protein L38, putative n=1 Tax=Pediculus humanus corporis RepID=E0VN30_PEDHC 7.0e-10
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 60S ribosomal protein L38 1.012e-18
Putative Complete
sp_v3.0_unigene151427 SustainPine v3.0 219
AutoFact: ribosomal protein L38, component of cytosolic 80S ribosome and 60S large subunit [Chlamydomonas reinhardtii] gb|AAO13217.1| 60S ribosomal protein L38 [Chlamydomonas reinhardtii] gb|EDO96835.1| ribosomal protein L38 [Chlamydomonas reinhardtii] 1.0e-11
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 60S ribosomal protein L38 1.012e-18
Putative Complete
sp_v3.0_unigene152558 SustainPine v3.0 160
AutoFact: 60S ribosomal protein L38 [Arabidopsis thaliana] ref|NP_191513.1| 60S ribosomal protein L38 [Arabidopsis thaliana] ref|XP_002878277.1| 60S ribosomal protein L38 [Arabidopsis lyrata subsp. lyrata] ref|XP_002881905.1| 60S ribosomal protein L38 [Arabidopsis 1.0e-11
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 60S ribosomal protein L38 3.221e-19
N-terminus
sp_v3.0_unigene153391 SustainPine v3.0 287
AutoFact: Calreticulin, putative n=4 Tax=Entamoeba RepID=B0ETB7_ENTDI 7.0e-24
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Calreticulin 7.00649e-45
Internal
sp_v3.0_unigene154324 SustainPine v3.0 276
AutoFact: 60S ribosomal protein L38 n=6 Tax=Ixodoidea RepID=RL38_ARGMO 4.0e-12
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 60S ribosomal protein L38 4.287e-19
Putative Complete
sp_v3.0_unigene156748 SustainPine v3.0 287
AutoFact: Calreticulin (Fragment) n=2 Tax=Triticeae RepID=Q40041_HORVU 5.0e-25
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Calreticulin 1.4013e-45
Internal
sp_v3.0_unigene156952 SustainPine v3.0 374
AutoFact: Calreticulin-like protein (Fragment) n=1 Tax=Thalassiosira pseudonana RepID=B8C4G1_THAPS 9.94922e-44
FL-Next: tr=Calreticulin; Pinus taeda (Loblolly pine). 0.0
Sma3: Calreticulin 1.4013e-45
Internal
sp_v3.0_unigene158181 SustainPine v3.0 255
AutoFact: 60S ribosomal protein L38 (Fragment) n=1 Tax=Brachionus plicatilis RepID=B7FDL2_BRAPC 8.0e-09
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 60S ribosomal protein L38 7.036e-19
Putative Complete
sp_v3.0_unigene183161 SustainPine v3.0 532
AutoFact: Calreticulin n=1 Tax=Dictyostelium discoideum RepID=CALR_DICDI 2.0e-39
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Calreticulin 8.40779e-45
C-terminus
sp_v3.0_unigene192664 SustainPine v3.0 235
AutoFact: RecName: Full=60S ribosomal protein L38 sp|A6N9N3.1|RL38_ORNPR RecName: Full=60S ribosomal protein L38 gb|ABI52679.1| 60S ribosomal protein L38 [Argas monolakensis] gb|ABR23366.1| 60S ribosomal protein L38 [Ornithodoros parkeri] 1.0e-19
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ribosomal L38e protein family 0.0
Putative Complete
sp_v3.0_unigene193059 SustainPine v3.0 594
AutoFact: Calreticulin n=1 Tax=Dictyostelium discoideum RepID=CALR_DICDI 1.00053e-42
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Calreticulin 0.0
C-terminus
sp_v3.0_unigene207785 SustainPine v3.0 555
AutoFact: 60S ribosomal protein L38, putative n=1 Tax=Ricinus communis RepID=B9T6H4_RICCO 4.0e-21
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 60S ribosomal protein L38 3.997e-19
Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain