Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Translation elongation factor IF5A

Term: IPR001884  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene75797 SustainPine v3.0 409
AutoFact: Eukaryotic translation initiation factor 5A-1 n=47 Tax=Magnoliophyta RepID=IF5A1_MEDSA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Eukaryotic translation initiation factor eIF5A 0.0
Putative N-terminus
sp_v3.0_unigene76059 SustainPine v3.0 136
AutoFact: Eukaryotic translation initiation factor 5A n=3 Tax=Picea RepID=Q3ZDK6_PICAB 6.0e-17
FL-Next: tr=Eukaryotic translation initiation factor 5A; Picea abies (Norway spruce) (Picea excelsa). 0.0
Sma3: Eukaryotic translation initiation factor 5A 4.418e-28
Internal
sp_v3.0_unigene126834 SustainPine v3.0 1274
AutoFact: Eukaryotic translation initiation factor 5A 2 n=3 Tax=Picea RepID=Q3ZDK4_PICAB 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative uncharacterized protein 0.0
Misassembled
sp_v3.0_unigene126869 SustainPine v3.0 1245
AutoFact: Eukaryotic translation initiation factor 5A 4 n=1 Tax=Picea abies RepID=Q3ZDK5_PICAB 0.0
FL-Next: tr=Eukaryotic translation initiation factor 5A 4; Picea abies (Norway spruce) (Picea excelsa). 0.0
Sma3: Eukaryotic translation initiation factor 5A 7.71e-28
Misassembled
sp_v3.0_unigene127496 SustainPine v3.0 532
AutoFact: Eukaryotic translation initiation factor 5A n=3 Tax=Picea RepID=Q3ZDK6_PICAB 2.0e-27
FL-Next: tr=Eukaryotic translation initiation factor 5A; Picea abies (Norway spruce) (Picea excelsa). 0.0
Sma3: Eukaryotic translation initiation factor 5A 4.053e-27
Putative Complete
sp_v3.0_unigene143172 SustainPine v3.0 825
AutoFact: Eukaryotic translation initiation factor 5A 2 n=3 Tax=Picea RepID=Q3ZDK4_PICAB 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Eukaryotic translation initiation factor 5A 6.397e-28
Putative Complete
sp_v3.0_unigene144211 SustainPine v3.0 662
AutoFact: Chain B, Localization Of The Small Subunit Ribosomal Proteins Into A 5.5 A Cryo-Em Map Of Triticum Aestivum Translating 80s Ribosome gb|AAM92710.1| putative 40S ribosomal protein S3 [Triticum aestivum] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 40S ribosomal protein S3 1.218e-10
Complete
sp_v3.0_unigene144226 SustainPine v3.0 733
AutoFact: Eukaryotic translation initiation factor 5A 2 n=3 Tax=Picea RepID=Q3ZDK4_PICAB 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Eukaryotic translation initiation factor 5A 6.199e-28
Complete
sp_v3.0_unigene144723 SustainPine v3.0 525
AutoFact: Eukaryotic translation initiation factor 5A 2 n=3 Tax=Picea RepID=Q3ZDK4_PICAB 3.0e-31
FL-Next: tr=Eukaryotic translation initiation factor 5A 2; Picea abies (Norway spruce) (Picea excelsa). 0.0
Sma3: Translation initiation factor 5A 3.478e-16
Complete
sp_v3.0_unigene144736 SustainPine v3.0 210
AutoFact: Eukaryotic translation initiation factor 5A 2 n=3 Tax=Picea RepID=Q3ZDK4_PICAB 1.0e-13
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Eukaryotic translation initiation factor 5A-1 1.178e-14
Putative C-terminus
sp_v3.0_unigene150175 SustainPine v3.0 222
AutoFact: Eukaryotic translation initiation factor eIF-5A n=1 Tax=Aspergillus flavus NRRL3357 RepID=B8N3H7_ASPFN 5.0e-22
FL-Next: tr=Eukaryotic translation initiation factor 5A 4; Picea abies (Norway spruce) (Picea excelsa). 0.0
Sma3: Eukaryotic translation initiation factor 5A-4 1.069e-08
Internal
sp_v3.0_unigene151505 SustainPine v3.0 499
AutoFact: Eukaryotic translation initiation factor 5A n=3 Tax=Picea RepID=Q3ZDK6_PICAB 4.0e-35
FL-Next: tr=Eukaryotic translation initiation factor 5A; Picea abies (Norway spruce) (Picea excelsa). 0.0
Sma3: Eukaryotic translation initiation factor 5A 2.288e-20
Putative Complete
sp_v3.0_unigene152549 SustainPine v3.0 284
AutoFact: Eukaryotic translation initiation factor 5A n=1 Tax=Postia placenta Mad-698-R RepID=B8PCC0_POSPM 3.0e-39
FL-Next: tr=Eukaryotic translation initiation factor 5A; Picea abies (Norway spruce) (Picea excelsa). 0.0
Sma3: Eukaryotic translation initiation factor 5A 6.006e-28
Putative N-terminus
sp_v3.0_unigene153063 SustainPine v3.0 534
AutoFact: 40S ribosomal protein S3-1 [Arabidopsis thaliana] sp|Q9SIP7.1|RS31_ARATH RecName: Full=40S ribosomal protein S3-1 gb|AAK55690.1|AF378887_1 At2g31610/T9H9.13 [Arabidopsis thaliana] gb|AAD24852.1| 40S ribosomal protein; contains C-terminal domain [Arabidops 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 40S ribosomal protein S3 1.377e-10
Internal
sp_v3.0_unigene153507 SustainPine v3.0 399
AutoFact: Eukaryotic translation initiation factor 5A n=1 Tax=Dianthus caryophyllus RepID=IF5A_DIACA 7.0e-39
FL-Next: tr=Eukaryotic translation initiation factor 5A 4; Picea abies (Norway spruce) (Picea excelsa). 0.0
Sma3: Eukaryotic translation initiation factor 5A 6.397e-28
N-terminus
sp_v3.0_unigene153516 SustainPine v3.0 354
AutoFact: ribosomal protein S3 [Lethenteron japonicum] 7.0e-40
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative 40S ribosomal protein 2.625e-07
Internal
sp_v3.0_unigene154349 SustainPine v3.0 327
AutoFact: Eukaryotic translation initiation factor 5A-1 n=20 Tax=Saccharomycetaceae RepID=IF5A1_YEAST 4.0e-21
FL-Next: tr=Eukaryotic translation initiation factor 5A 2; Picea abies (Norway spruce) (Picea excelsa). 0.0
Sma3: Eukaryotic translation initiation factor 5A 2 8.982e-10
C-terminus
sp_v3.0_unigene154791 SustainPine v3.0 247
AutoFact: Eukaryotic translation initiation factor 5A-1 n=20 Tax=Saccharomycetaceae RepID=IF5A1_YEAST 1.0e-21
FL-Next: tr=Eukaryotic translation initiation factor 5A 2; Picea abies (Norway spruce) (Picea excelsa). 0.0
Sma3: eIF-5A-2 4.017e-16
Putative C-terminus
sp_v3.0_unigene154878 SustainPine v3.0 447
AutoFact: Translation initiation factor 5A n=1 Tax=Glossina morsitans morsitans RepID=D3TMH0_GLOMM 0.0
FL-Next: tr=Eukaryotic translation initiation factor 5A 2; Picea abies (Norway spruce) (Picea excelsa). 0.0
Sma3: Eukaryotic translation initiation factor 5A 4.491e-28
N-terminus
sp_v3.0_unigene154949 SustainPine v3.0 425
AutoFact: Eukaryotic translation initiation factor eIF-5A n=1 Tax=Neosartorya fischeri NRRL 181 RepID=A1D4L5_NEOFI 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Eukaryotic translation initiation factor 5A 6.811e-28
N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain