Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: thylakoid

Term: GO:0009579  Help

Source: GO from Sma3

Ontology: Cellular Component

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene203093 SustainPine v3.0 479
• AutoFact: ATP synthase subunit beta n=1 Tax=Polytomella sp. Pringsheim 198.80 RepID=A0ZW41_9CHLO 6.02558e-44
• FL-Next: sp=ATP synthase subunit beta; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: ATP synthase subunit beta, chloroplastic 1.255e-28
Putative C-terminus
sp_v3.0_unigene203149 SustainPine v3.0 312
• AutoFact: quinone oxidoreductase-like protein [Arabidopsis thaliana] sp|Q9ZUC1.2|QORL_ARATH RecName: Full=Quinone oxidoreductase-like protein At1g23740, chloroplastic; Flags: Precursor gb|AAL06488.1|AF411799_1 At1g23740/F5O8_27 [Arabidopsis thaliana] gb|AAM16188.1| 3.0e-10
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Quinone oxidoreductase-like protein 5.041e-07
N-terminus
sp_v3.0_unigene204318 SustainPine v3.0 316
• AutoFact: DUF659 domain containing protein 7.0e-18
• FL-Next: tr=Putative uncharacterized protein; Medicago truncatula (Barrel medic) (Medicago tribuloides). 0.0
Internal
sp_v3.0_unigene204534 SustainPine v3.0 654
• AutoFact: ATP synthase subunit beta n=1 Tax=Sulfurospirillum deleyianum DSM 6946 RepID=D1AZT5_SULD5 2.0e-33
• FL-Next: sp=ATP synthase subunit beta; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: ATP synthase subunit beta, chloroplastic 1.359e-24
C-terminus
sp_v3.0_unigene204649 SustainPine v3.0 502
• AutoFact: 26S protease regulatory subunit 6A n=4 Tax=leotiomyceta RepID=A6SQ02_BOTFB 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Proteasomal ATPase 8.006e-14
Putative C-terminus
sp_v3.0_unigene204990 SustainPine v3.0 461
• AutoFact: Nucleoside diphosphate kinase n=1 Tax=Polysphondylium pallidum RepID=D3BL27_POLPA 5.0e-21
• FL-Next: sp=Nucleoside diphosphate kinase; Pinus pinaster (Maritime pine). 0.0
• Sma3: Nucleoside diphosphate kinase 0.0
Internal
sp_v3.0_unigene205468 SustainPine v3.0 376
• AutoFact: Nucleoside diphosphate kinase n=2 Tax=Pyrenophora RepID=B2WLH9_PYRTR 2.0e-35
• FL-Next: sp=Nucleoside diphosphate kinase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Nucleoside diphosphate kinase 0.0
N-terminus
sp_v3.0_unigene205657 SustainPine v3.0 533
• AutoFact: Superoxide dismutase [Cu-Zn] n=1 Tax=Branchiostoma floridae RepID=C3ZM91_BRAFL 0.0
• FL-Next: sp=Superoxide dismutase [Cu-Zn]; Pinus sylvestris (Scots pine). 0.0
• Sma3: Superoxide dismutase [Cu-Zn] 0.0
Putative Complete
sp_v3.0_unigene205670 SustainPine v3.0 354
• AutoFact: Peroxiredoxin n=1 Tax=Pinctada fucata RepID=D3K380_PINFU 3.0e-35
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Thioredoxin peroxidase 2.461e-16
Internal
sp_v3.0_unigene205765 SustainPine v3.0 877
• AutoFact: Fructose-bisphosphate aldolase n=1 Tax=Picea sitchensis RepID=A9NMQ0_PICSI 0.0
• FL-Next: sp=Fructose-bisphosphate aldolase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Fructose-bisphosphate aldolase 0.0
C-terminus
sp_v3.0_unigene205921 SustainPine v3.0 532
• AutoFact: DUF659 domain containing protein 3.0e-28
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
• Sma3: Transposase-like protein 3.668e-06
Internal
sp_v3.0_unigene206102 SustainPine v3.0 288
• AutoFact: Putative early light-induced protein (Fragment) n=1 Tax=Cupressus sempervirens RepID=B6V6N2_9CONI 2.0e-16
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: ELIP 3.627e-17
C-terminus
sp_v3.0_unigene206277 SustainPine v3.0 583
• AutoFact: Glutathione S-transferase-like protein n=13 Tax=Picea sitchensis RepID=C0PR46_PICSI 5.99756e-43
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Glutathione S-transferase 3.347e-36
C-terminus
sp_v3.0_unigene206958 SustainPine v3.0 1256
• AutoFact: Glutathione S-transferase-like protein n=13 Tax=Picea sitchensis RepID=C0PR46_PICSI 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Glutathione S-transferase 0.0
Complete
sp_v3.0_unigene207127 SustainPine v3.0 736
• AutoFact: DUF659 domain containing protein 7.0e-30
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative Complete
sp_v3.0_unigene207712 SustainPine v3.0 784
• AutoFact: component of 6.1 kDa polypeptide of photosystem II reaction center [Brassica rapa] 9.0e-06
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Photosystem II reaction center W protein, chloroplastic 9.483e-13
Complete
sp_v3.0_unigene207753 SustainPine v3.0 614
• AutoFact: cyclic nucleotide gated channel 8 [Arabidopsis thaliana] sp|Q9FXH6.2|CNGC8_ARATH RecName: Full=Putative cyclic nucleotide-gated ion channel 8; AltName: Full=Cyclic nucleotide- and calmodulin-regulated ion channel 8 gb|AEE29896.1| cyclic nucleotide gated c 0.0
• FL-Next: sp=Putative cyclic nucleotide-gated ion channel 8; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: Cyclic nucleotide-gated ion channel, putative 1.152e-28
Internal
sp_v3.0_unigene207815 SustainPine v3.0 492
• AutoFact: Light-harvesting complex n=1 Tax=Selaginella moellendorffii RepID=D8SUF1_SELML 8.00001e-42
• FL-Next: tr=Chlorophyll a/b-binding protein; Pinus thunbergii (Japanese black pine) (Pinus thunbergiana). 0.0
• Sma3: LHCP 8.341e-22
C-terminus
sp_v3.0_unigene207932 SustainPine v3.0 345
• AutoFact: Translationally-controlled tumor protein homolog n=4 Tax=Pinaceae RepID=TCTP_PSEMZ 2.0e-35
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Translationally-controlled tumor protein homolog 0.0
Putative N-terminus
sp_v3.0_unigene207985 SustainPine v3.0 286
• AutoFact: Chlorophyll a-b binding protein type 2 member 1A, chloroplastic n=37 Tax=Spermatophyta RepID=CB2A_PINSY 2.00386e-43
• FL-Next: sp=Chlorophyll a-b binding protein type 2 member 1A, chloroplastic; Pinus sylvestris (Scots pine). 0.0
• Sma3: LHCP 8.322e-29
Putative C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain