Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: thylakoid

Term: GO:0009579  Help

Source: GO from Sma3

Ontology: Cellular Component

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene167616 SustainPine v3.0 94
• AutoFact: Glycosyl hydrolase family 1 protein n=1 Tax=Arabidopsis lyrata subsp. lyrata RepID=D7LL70_ARALL 7.0e-07
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Beta-glucosidase 2.186e-08
Putative C-terminus
sp_v3.0_unigene167847 SustainPine v3.0 215
• AutoFact: Transketolase-like protein n=9 Tax=core eudicotyledons RepID=Q9LZY8_ARATH 1.0e-13
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: TK 3.924e-23
Internal
sp_v3.0_unigene168253 SustainPine v3.0 174
• AutoFact: cell division protein [Guillardia theta] sp|O78516.1|FTSH_GUITH RecName: Full=ATP-dependent zinc metalloprotease FtsH gb|AAC35738.1| hypothetical chloroplast RF25 [Guillardia theta] 9.0e-16
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Cell division protease ftsH homolog 1.872e-14
Internal
sp_v3.0_unigene172794 SustainPine v3.0 310
• Sma3: Photosystem I reaction centre, subunit VIII 6.335e-06
coding
sp_v3.0_unigene183091 SustainPine v3.0 227
• AutoFact: transketolase [Nicotiana attenuata] 8.0e-31
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: TK 6.5e-23
Internal
sp_v3.0_unigene183383 SustainPine v3.0 476
• AutoFact: Protein dimerization, putative n=1 Tax=Ricinus communis RepID=B9SWK8_RICCO 2.0e-24
• FL-Next: tr=Protein dimerization, putative; Ricinus communis (Castor bean). 0.0
Internal
sp_v3.0_unigene183651 SustainPine v3.0 442
• AutoFact: RecName: Full=Translationally-controlled tumor protein homolog; Short=TCTP emb|CAA10048.1| TCTP-like protein [Pseudotsuga menziesii] 6.0e-09
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Translationally-controlled tumor protein homolog 2.353e-18
C-terminus
sp_v3.0_unigene184473 SustainPine v3.0 293
• AutoFact: Preprotein translocase subunit secA n=1 Tax=Arabidopsis thaliana RepID=F4JG57_ARATH 1.99965e-42
• FL-Next: sp=Protein translocase subunit SECA1, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: Protein translocase subunit secA 2.337e-27
Internal
sp_v3.0_unigene185341 SustainPine v3.0 678
• AutoFact: peroxiredoxin 4, isoform CRA_a [Rattus norvegicus] 0.0
• FL-Next: tr=Peroxiredoxin-2; Phytophthora infestans (strain T30-4) (Potato late blight fungus). 0.0
• Sma3: Thioredoxin peroxidase 5.488e-16
Complete
sp_v3.0_unigene186380 SustainPine v3.0 542
• AutoFact: Peroxiredoxins, prx-1, prx-2, prx-3 n=1 Tax=Aedes aegypti RepID=Q16IW1_AEDAE 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Thioredoxin peroxidase 6.062e-16
Internal
sp_v3.0_unigene186476 SustainPine v3.0 954
• AutoFact: DUF659 domain containing protein 9.0e-39
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: DNA binding protein, putative 3.017e-08
Putative N-terminus
sp_v3.0_unigene186477 SustainPine v3.0 644
• AutoFact: DUF659 domain containing protein 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: DNA binding protein, putative 2.652e-06
Complete
sp_v3.0_unigene186508 SustainPine v3.0 444
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Internal
sp_v3.0_unigene186907 SustainPine v3.0 235
• AutoFact: serine/threonine-protein kinase SNT7 [Arabidopsis thaliana] sp|Q9S713.1|STT7_ARATH RecName: Full=Serine/threonine-protein kinase STN7, chloroplastic; AltName: Full=Protein STATE TRANSITION 7; AltName: Full=Stt7 homolog; Flags: Precursor gb|AAG51596.1|AC01 2.0e-27
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene188060 SustainPine v3.0 489
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Internal
sp_v3.0_unigene188236 SustainPine v3.0 647
• AutoFact: Photosystem II 22 kDa protein, chloroplastic n=5 Tax=Brassicaceae RepID=PSBS_ARATH 8.0e-24
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Photosystem II 22 kDa protein, chloroplastic 3.485e-16
C-terminus
sp_v3.0_unigene188342 SustainPine v3.0 242
• AutoFact: Aaa-metalloprotease chloroplast n=1 Tax=Micromonas sp. RCC299 RepID=C1FDU0_MICSR 1.0e-33
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Cell division protease ftsH homolog 8.829e-16
Internal
sp_v3.0_unigene188394 SustainPine v3.0 660
• AutoFact: AhpC/TSA family protein n=1 Tax=Capsaspora owczarzaki ATCC 30864 RepID=E9BW06_9EUKA 0.0
• FL-Next: tr=2-cys peroxiredoxin; Chlamydomonas reinhardtii (Chlamydomonas smithii). 0.0
• Sma3: Thioredoxin peroxidase 7.709e-16
Complete
sp_v3.0_unigene188444 SustainPine v3.0 349
• AutoFact: Nucleoside diphosphate kinase n=4 Tax=Trichocomaceae RepID=NDK_ASPFU 6.0e-28
• FL-Next: sp=Nucleoside diphosphate kinase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Nucleoside diphosphate kinase 0.0
C-terminus
sp_v3.0_unigene188604 SustainPine v3.0 1022
• AutoFact: Photosystem I reaction center subunit IV A, chloroplast n=1 Tax=Ricinus communis RepID=B9S592_RICCO 3.0e-15
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Photosystem I reaction center subunit IV A 2.837e-12
Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain