Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: thylakoid

Term: GO:0009579  Help

Source: GO from Sma3

Ontology: Cellular Component


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene13416 SustainPine v3.0 728
AutoFact: putative Na+-dependent inorganic phosphate cotransporter [Arabidopsis thaliana] gb|AAM48002.1| putative Na+-dependent inorganic phosphate cotransporter [Arabidopsis thaliana] 3.0e-32
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative N-terminus
sp_v3.0_unigene13792 SustainPine v3.0 908
AutoFact: Heat shock 70 kDa protein, mitochondrial n=3 Tax=rosids RepID=HSP7M_PHAVU 0.0
FL-Next: tr=Luminal binding protein; Pseudotsuga menziesii (Douglas-fir) (Abies menziesii). 0.0
Sma3: Heat shock protein 70 0.0
N-terminus
sp_v3.0_unigene14155 SustainPine v3.0 928
AutoFact: Probable anion transporter 1, chloroplastic n=2 Tax=Oryza sativa RepID=PHT41_ORYSJ 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Sialin, putative 5.391e-13
C-terminus
sp_v3.0_unigene14301 SustainPine v3.0 384
AutoFact: Unassigned protein
FL-Next: tr=Cell wall-associated hydrolase; Medicago truncatula (Barrel medic) (Medicago tribuloides). 0.0
C-terminus
sp_v3.0_unigene14655 SustainPine v3.0 124
AutoFact: photosystem I assembly protein Ycf4 [Pinus thunbergii] sp|P41620.1|YCF4_PINTH RecName: Full=Photosystem I assembly protein ycf4 dbj|BAA04362.1| ORF184 [Pinus thunbergii] gb|ACP50846.1| photosystem I assembly protein ycf4 [Pinus resinosa] gb|ACP51154.1| ph 1.0e-10
FL-Next: tr=ORF53d; Pinus koraiensis (Korean pine). Plastid; Chloroplast. 0.0
Sma3: Photosystem I assembly protein ycf4 3.674e-25
Putative Complete
sp_v3.0_unigene14691 SustainPine v3.0 815
AutoFact: Zinc/iron transporter, putative n=1 Tax=Ricinus communis RepID=B9SP03_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: ZIP transporter 1.192e-31
C-terminus
sp_v3.0_unigene14818 SustainPine v3.0 1598
AutoFact: Putative 9-cis-epoxycarotenoid dioxygenase n=9 Tax=Cupressaceae RepID=Q0EEH1_TAXDI 0.0
FL-Next: tr=Putative 9-cis-epoxycarotenoid dioxygenase; Taxodium distichum (Bald cypress) (Cupressus disticha). 0.0
Sma3: 9-cis-epoxycarotenoid dioxygenase 3.005e-40
N-terminus
sp_v3.0_unigene14856 SustainPine v3.0 967
AutoFact: putative peroxiredoxin protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Peroxiredoxin 1.662e-15
C-terminus
sp_v3.0_unigene15088 SustainPine v3.0 743
AutoFact: Translationally-controlled tumor protein homolog n=2 Tax=Oryza sativa Japonica Group RepID=TCTP_ORYSJ 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Translationally-controlled tumor protein homolog 0.0
N-terminus
sp_v3.0_unigene15128 SustainPine v3.0 456
AutoFact: cytochrome c biogenesis protein CCS1 [Arabidopsis thaliana] sp|Q9XIA4.1|CCS1_ARATH RecName: Full=Cytochrome c biogenesis protein CCS1, chloroplastic; AltName: Full=C-type cytochrome synthesis protein 1; Flags: Precursor gb|AAD43162.1|AC007504_17 Similar t 6.0e-30
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Cytochrome c biogenesis protein CCS1, chloroplastic 6.859e-14
C-terminus
sp_v3.0_unigene15410 SustainPine v3.0 644
AutoFact: ATP-dependent peptidase n=1 Tax=Coprinopsis cinerea okayama7#130 RepID=A8NFF7_COPC7 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Cell division protease ftsH homolog 4, mitochondrial 5.902e-08
Internal
sp_v3.0_unigene16129 SustainPine v3.0 1180
AutoFact: Phi class glutathione transferase n=1 Tax=Cathaya argyrophylla RepID=B8YDC4_9CONI 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Glutathione S-transferase 0.0
Complete
sp_v3.0_unigene16202 SustainPine v3.0 256
AutoFact: NADH dehydrogenase iron-sulfur protein 2, mitochondrial n=1 Tax=Culex quinquefasciatus RepID=B0WWS9_CULQU 2.0e-31
FL-Next: sp=NAD(P)H-quinone oxidoreductase subunit H, chloroplastic; Cephalotaxus wilsoniana. Plastid; Chloroplast. 0.0
Sma3: NADH dehydrogenase subunit 7 0.0
Internal
sp_v3.0_unigene16479 SustainPine v3.0 564
AutoFact: Putative 9-cis-epoxycarotenoid dioxygenase n=9 Tax=Cupressaceae RepID=Q0EEH1_TAXDI 1.0e-32
FL-Next: tr=Putative 9-cis-epoxycarotenoid dioxygenase; Cryptomeria japonica (Japanese cedar) (Cupressus japonica). 0.0
Sma3: 9-cis-epoxycarotenoid dioxygenase 7.4e-26
C-terminus
sp_v3.0_unigene16680 SustainPine v3.0 598
AutoFact: Cell division protease ftsH, putative n=1 Tax=Ricinus communis RepID=B9SIY9_RICCO 1.0e-39
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Membrane AAA-metalloprotease 5.882e-09
Internal
sp_v3.0_unigene16779 SustainPine v3.0 1448
AutoFact: translation-inhibitor protein [Gentiana triflora] dbj|BAD00048.1| perchloric acid soluble translation inhibitor protein homolog [Gentiana triflora] 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Complete
sp_v3.0_unigene16801 SustainPine v3.0 903
AutoFact: PAP_fibrillin domain containing protein 2.0e-06
FL-Next: Isoform 3 of Probable plastid-lipid-associated protein 13, chloroplastic OS=Arabidopsis thaliana GN=PAP13 0.0
N-terminus
sp_v3.0_unigene16852 SustainPine v3.0 855
AutoFact: Protein translocase subunit secA (Fragment) n=2 Tax=Vitis vinifera RepID=E0CR18_VITVI 0.0
FL-Next: Isoform 2 of Protein translocase subunit SECA2, chloroplastic OS=Arabidopsis thaliana GN=SECA2 0.0
Sma3: Protein translocase subunit secA 1.852e-19
Internal
sp_v3.0_unigene16993 SustainPine v3.0 994
AutoFact: Ribulose bisphosphate carboxylase small chain, chloroplastic n=1 Tax=Pinus thunbergii RepID=RBS_PINTH 0.0
FL-Next: sp=Ribulose bisphosphate carboxylase small chain, chloroplastic; Pinus thunbergii (Japanese black pine) (Pinus thunbergiana). 0.0
Sma3: Ribulose bisphosphate carboxylase small chain 0.0
Complete
sp_v3.0_unigene17020 SustainPine v3.0 1089
AutoFact: Ribulose bisphosphate carboxylase small chain, chloroplastic n=1 Tax=Pinus thunbergii RepID=RBS_PINTH 0.0
FL-Next: sp=Ribulose bisphosphate carboxylase small chain, chloroplastic; Pinus thunbergii (Japanese black pine) (Pinus thunbergiana). 0.0
Sma3: Ribulose bisphosphate carboxylase small chain 0.0
Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain