Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: thylakoid

Term: GO:0009579  Help

Source: GO from Sma3

Ontology: Cellular Component


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene55067 SustainPine v3.0 324
AutoFact: GrpE protein homolog n=1 Tax=Picea sitchensis RepID=A9NPB5_PICSI 8.0e-20
FL-Next: sp=GrpE protein homolog; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: GrpE protein homolog 1.377e-19
C-terminus
sp_v3.0_unigene55371 SustainPine v3.0 384
AutoFact: DUF659 domain containing protein 2.0e-31
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Putative C-terminus
sp_v3.0_unigene55591 SustainPine v3.0 298
AutoFact: PsaO subunit of photosystem I n=1 Tax=Physcomitrella patens subsp. patens RepID=A9TK37_PHYPA 7.0e-37
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative 16kDa membrane protein 7.581e-10
C-terminus
sp_v3.0_unigene55655 SustainPine v3.0 350
AutoFact: LI818r-1 protein n=1 Tax=Chlamydomonas reinhardtii RepID=P93664_CHLRE 1.0e-15
FL-Next: sp=Chlorophyll a-b binding protein L1818, chloroplastic; Chlamydomonas moewusii (Chlamydomonas eugametos). 0.0
Sma3: LI818r-1 protein 9.88e-10
Putative C-terminus
sp_v3.0_unigene56052 SustainPine v3.0 487
AutoFact: Chlorophyll a-b binding protein type I, chloroplastic n=12 Tax=Pinaceae RepID=CB21_PINTH 9.0e-26
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: LHCP 2.533e-16
C-terminus
sp_v3.0_unigene56203 SustainPine v3.0 428
AutoFact: Photosystem II protein D2 (Fragment) n=2 Tax=Chlamydomonas reinhardtii RepID=B8XSL6_CHLRE 0.0
FL-Next: sp=Photosystem II D2 protein; Cephalotaxus wilsoniana. Plastid; Chloroplast. 0.0
Sma3: Photosystem II D2 protein 7.252e-22
N-terminus
sp_v3.0_unigene56214 SustainPine v3.0 224
AutoFact: peroxiredoxin [Hyacinthus orientalis] 5.0e-09
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene56260 SustainPine v3.0 470
AutoFact: Protein translocase subunit secA, chloroplastic n=1 Tax=Ostreococcus lucimarinus CCE9901 RepID=SECA_OSTLU 0.0
FL-Next: sp=Protein translocase subunit SecA, chloroplastic; Ostreococcus lucimarinus (strain CCE9901). 0.0
Sma3: Protein translocase subunit secA 0.0
Internal
sp_v3.0_unigene56343 SustainPine v3.0 295
AutoFact: DUF659 domain containing protein 4.0e-38
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative N-terminus
sp_v3.0_unigene56397 SustainPine v3.0 365
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Internal
sp_v3.0_unigene56655 SustainPine v3.0 462
AutoFact: Heat shock protein HSS1 n=2 Tax=Pucciniales RepID=E3KYT3_PUCGT 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Heat shock protein 70 1.4013e-45
Internal
sp_v3.0_unigene56662 SustainPine v3.0 505
AutoFact: Photosystem II D2 protein n=1 Tax=Caulerpa filiformis RepID=B9VL90_9CHLO 0.0
FL-Next: sp=Photosystem II D2 protein; Halocarpus kirkii. Plastid; Chloroplast. 0.0
Sma3: Photosystem II D2 protein 6.508e-28
Putative N-terminus
sp_v3.0_unigene56715 SustainPine v3.0 492
AutoFact: DUF659 domain containing protein 0.0
FL-Next: tr=Putative uncharacterized protein; Medicago truncatula (Barrel medic) (Medicago tribuloides). 0.0
Internal
sp_v3.0_unigene56882 SustainPine v3.0 451
AutoFact: Superoxide dismutase [Cu-Zn] n=2 Tax=Pyrenophora RepID=B2VRY4_PYRTR 0.0
FL-Next: sp=Superoxide dismutase [Cu-Zn]; Pinus sylvestris (Scots pine). 0.0
Sma3: Superoxide dismutase [Cu-Zn] 0.0
N-terminus
sp_v3.0_unigene56903 SustainPine v3.0 346
AutoFact: DUF659 domain containing protein 5.60519e-45
FL-Next: tr=Putative uncharacterized protein; Medicago truncatula (Barrel medic) (Medicago tribuloides). 0.0
Sma3: HAT dimerisation domain-containing protein-like 4.034e-07
Internal
sp_v3.0_unigene56905 SustainPine v3.0 415
AutoFact: Chlorophyll a-b binding protein 2 n=1 Tax=Zea mays RepID=B6SZ08_MAIZE 0.0
FL-Next: tr=Chlorophyll a/b-binding protein; Pinus thunbergii (Japanese black pine) (Pinus thunbergiana). 0.0
Sma3: LHCP 6.372e-29
Internal
sp_v3.0_unigene56980 SustainPine v3.0 432
AutoFact: Chloroplast light harvesting chlorophyll a/b binding protein (Fragment) n=7 Tax=Pinaceae RepID=Q4VV52_PINST 4.0e-24
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: LHCP 1.13e-16
N-terminus
sp_v3.0_unigene57033 SustainPine v3.0 307
AutoFact: Fructose-bisphosphate aldolase n=1 Tax=Oryza sativa Japonica Group RepID=Q53P96_ORYSJ 1.0e-19
FL-Next: sp=Fructose-bisphosphate aldolase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Fructose-bisphosphate aldolase 0.0
Putative N-terminus
sp_v3.0_unigene57060 SustainPine v3.0 411
AutoFact: Chlorophyll a-b binding protein type I, chloroplastic n=12 Tax=Pinaceae RepID=CB21_PINTH 4.0e-27
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: LHCP 1.356e-18
Putative Complete
sp_v3.0_unigene57073 SustainPine v3.0 296
AutoFact: Chlorophyll a-b binding protein of LHCII n=2 Tax=Chlamydomonas RepID=Q9ZSJ4_CHLRE 2.0e-34
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: LHCP 1.457e-23
Putative C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain