Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: thylakoid

Term: GO:0009579  Help

Source: GO from Sma3

Ontology: Cellular Component

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene49194 SustainPine v3.0 181
• AutoFact: DUF659 domain containing protein 1.0e-11
unknown
sp_v3.0_unigene50736 SustainPine v3.0 197
• AutoFact: 9-cis-epoxycarotenoid dioxygenase NCED2, chloroplastic n=2 Tax=Arabidopsis RepID=NCED2_ARATH 2.0e-21
• FL-Next: tr=Putative 9-cis-epoxycarotenoid dioxygenase; Taxodium distichum (Bald cypress) (Cupressus disticha). 0.0
• Sma3: 9-cis-epoxycarotenoid dioxygenase 6.352e-36
Internal
sp_v3.0_unigene50940 SustainPine v3.0 239
• AutoFact: [O] COG0464 ATPases of the AAA+ class 5.0e-23
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Cell division cycle protein 48 homolog 1.609e-10
Internal
sp_v3.0_unigene51258 SustainPine v3.0 247
• AutoFact: Glutathione S-transferase-like protein (Fragment) n=9 Tax=Picea sitchensis RepID=E5F6M4_PICSI 3.0e-23
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Glutathione-S-transferase 1.636e-06
N-terminus
sp_v3.0_unigene51349 SustainPine v3.0 546
• AutoFact: pfam08240, ADH_N, Alcohol dehydrogenase GroES-like domain 6.0e-11
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Quinone oxidoreductase-like protein 5.951e-07
N-terminus
sp_v3.0_unigene51402 SustainPine v3.0 476
• AutoFact: Chlorophyll a-b binding protein 4, chloroplastic n=2 Tax=core eudicotyledons RepID=CB24_SOLLC 0.0
• FL-Next: tr=Chlorophyll a/b-binding protein; Pinus thunbergii (Japanese black pine) (Pinus thunbergiana). 0.0
• Sma3: LHCP 5.572e-24
C-terminus
sp_v3.0_unigene51416 SustainPine v3.0 615
• AutoFact: Lhcb5 protein n=6 Tax=Pinaceae RepID=Q41040_PINSY 1.0e-35
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Chlorophyll a/b-binding protein 9.073e-13
C-terminus
sp_v3.0_unigene51417 SustainPine v3.0 599
• AutoFact: Fructose-bisphosphate aldolase n=2 Tax=Picea sitchensis RepID=A9NP14_PICSI 2.0e-39
• FL-Next: sp=Fructose-bisphosphate aldolase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Fructose-bisphosphate aldolase 0.0
C-terminus
sp_v3.0_unigene51560 SustainPine v3.0 326
• AutoFact: Chlorophyll a-b binding protein type I, chloroplastic n=12 Tax=Pinaceae RepID=CB21_PINTH 2.0e-10
• FL-Next: tr=Chlorophyll a/b-binding protein; Pinus thunbergii (Japanese black pine) (Pinus thunbergiana). 0.0
• Sma3: Chlorophyll a-b binding protein of LHCII 1.762e-10
Putative N-terminus
sp_v3.0_unigene51583 SustainPine v3.0 774
• AutoFact: Cytochrome b559 subunit alpha n=9 Tax=Chlorophyta RepID=PSBE_CHLVU 2.0e-17
• FL-Next: sp=Cytochrome b559 subunit alpha; Podocarpus totara. Plastid; Chloroplast. 0.0
• Sma3: Cytochrome b559 subunit alpha 1.274e-24
C-terminus
sp_v3.0_unigene51602 SustainPine v3.0 695
• AutoFact: Peroxiredoxin n=4 Tax=Papilionoideae RepID=B3GV28_PEA 9.0e-32
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Peroxiredoxin 1.511e-15
Putative Complete
sp_v3.0_unigene51681 SustainPine v3.0 501
• AutoFact: Fructose-bisphosphate aldolase n=1 Tax=Picea sitchensis RepID=A9NMQ0_PICSI 0.0
• FL-Next: sp=Fructose-bisphosphate aldolase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Fructose-bisphosphate aldolase 0.0
N-terminus
sp_v3.0_unigene51951 SustainPine v3.0 344
• AutoFact: Chlorophyll A-B binding protein (CAB), putative n=2 Tax=Magnoliophyta RepID=Q1EPK5_MUSAC 0.0
• FL-Next: tr=Chlorophyll a/b-binding protein; Pinus thunbergii (Japanese black pine) (Pinus thunbergiana). 0.0
• Sma3: LHCP 4.147e-31
Internal
sp_v3.0_unigene52111 SustainPine v3.0 453
• AutoFact: Chloroplast light harvesting chlorophyll a/b binding protein (Fragment) n=7 Tax=Pinaceae RepID=Q4VV52_PINST 0.0
• FL-Next: tr=Chlorophyll a/b binding protein; Pinus contorta (Shore pine) (Lodgepole pine). 0.0
• Sma3: LHCP 1.639e-33
N-terminus
sp_v3.0_unigene52177 SustainPine v3.0 185
• AutoFact: Putative 2-cys peroxiredoxin (Fragment) n=1 Tax=Lemna minor RepID=C7DRS6_LEMMI 2.0e-25
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Thioredoxin peroxidase 7.442e-16
Internal
sp_v3.0_unigene52526 SustainPine v3.0 401
• AutoFact: DUF659 domain containing protein 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative N-terminus
sp_v3.0_unigene52565 SustainPine v3.0 227
• AutoFact: DUF659 domain containing protein 1.0e-11
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Internal
sp_v3.0_unigene52831 SustainPine v3.0 357
• AutoFact: ATP-dependent Clp protease proteolytic subunit n=1 Tax=Populus trichocarpa RepID=A9PAS6_POPTR 6.0e-21
• FL-Next: sp=ATP-dependent Clp protease proteolytic subunit; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: ATP-dependent Clp protease proteolytic subunit 0.0
Internal
sp_v3.0_unigene53021 SustainPine v3.0 303
• AutoFact: DUF659 domain containing protein 1.0e-39
• FL-Next: tr=DNA binding protein, putative; Ricinus communis (Castor bean). 0.0
• Sma3: Chromosome chr9 scaffold_90, whole genome shotgun sequence 7.136e-06
Internal
sp_v3.0_unigene53153 SustainPine v3.0 155
• AutoFact: LHC I type II chlorophyll binding protein (Fragment) n=1 Tax=Pinus sylvestris RepID=Q8RU80_PINSY 4.0e-17
• FL-Next: tr=Type II chlorophyll a /b-binding protein; Pinus sylvestris (Scots pine). 0.0
• Sma3: Chlorophyll A/B binding protein, putative 6.129e-17
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain