Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: photosystem II

Term: GO:0009523  Help

Source: GO from Sma3

Ontology: Cellular Component

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene80694 SustainPine v3.0 193
• AutoFact: chlorophyll a/b-binding protein [Mesembryanthemum crystallinum] 1.0e-20
• FL-Next: tr=Chlorophyll a/b-binding protein; Pinus thunbergii (Japanese black pine) (Pinus thunbergiana). 0.0
• Sma3: LHCP 1.191e-18
Internal
sp_v3.0_unigene80829 SustainPine v3.0 329
• AutoFact: Chlorophyll a-b binding protein type 2 member 1A, chloroplastic n=37 Tax=Spermatophyta RepID=CB2A_PINSY 6.0e-40
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Chloroplast chlorophyll A-B binding protein 40 2.26e-08
Complete
sp_v3.0_unigene81681 SustainPine v3.0 408
• AutoFact: Chlorophyll a-b binding protein 4, chloroplastic n=2 Tax=core eudicotyledons RepID=CB24_SOLLC 3.0e-29
• FL-Next: tr=Chlorophyll a/b-binding protein; Pinus thunbergii (Japanese black pine) (Pinus thunbergiana). 0.0
• Sma3: LHCP 3.328e-14
Internal
sp_v3.0_unigene101904 SustainPine v3.0 523
• AutoFact: Chlorophyll A/B binding protein, putative n=1 Tax=Ricinus communis RepID=B9R8V1_RICCO 0.0
• FL-Next: tr=Chlorophyll a/b-binding protein; Pinus thunbergii (Japanese black pine) (Pinus thunbergiana). 0.0
• Sma3: LHCP 1.445e-38
Internal
sp_v3.0_unigene107693 SustainPine v3.0 183
• AutoFact: Photosystem II CP43 chlorophyll apoprotein n=1 Tax=Ptilidium pulcherrimum RepID=F5GUZ9_9MARC 2.0e-28
• FL-Next: sp=Photosystem II CP43 chlorophyll apoprotein; Pinus arizonica. Plastid; Chloroplast. 0.0
• Sma3: Photosystem II CP43 chlorophyll apoprotein 1.088e-09
Internal
sp_v3.0_unigene111263 SustainPine v3.0 249
• AutoFact: Photosystem II CP47 chlorophyll apoprotein n=13 Tax=Chlorophyta RepID=PSBB_CHLVU 1.0e-38
• FL-Next: sp=Photosystem II CP47 chlorophyll apoprotein; Pinus amamiana. Plastid; Chloroplast. 0.0
• Sma3: Photosystem II CP47 chlorophyll apoprotein 6.265e-33
Internal
sp_v3.0_unigene112378 SustainPine v3.0 485
• AutoFact: pfam00504, Chloroa_b-bind, Chlorophyll A-B binding protein 6.0e-16
• FL-Next: sp=Chlorophyll a-b binding protein L1818, chloroplastic; Chlamydomonas moewusii (Chlamydomonas eugametos). 0.0
Putative N-terminus
sp_v3.0_unigene114739 SustainPine v3.0 93
• AutoFact: Photosystem II CP47 chlorophyll apoprotein n=28 Tax=Pinaceae RepID=C1IXH2_PICSI 1.0e-07
• FL-Next: sp=Photosystem II CP47 chlorophyll apoprotein; Pseudotsuga menziesii var. menziesii. Plastid; Chloroplast. 0.0
• Sma3: Protein CP-47 1.573e-25
Internal
sp_v3.0_unigene119095 SustainPine v3.0 509
• AutoFact: stress-related chlorophyll a/b binding protein 1 [Chlamydomonas reinhardtii] emb|CAA64632.1| LI818r-1 [Chlamydomonas reinhardtii] gb|EDP01074.1| stress-related chlorophyll a/b binding protein 1 [Chlamydomonas reinhardtii] 2.0e-34
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Protein fucoxanthin chlorophyll a/c protein 9.099e-13
C-terminus
sp_v3.0_unigene120281 SustainPine v3.0 320
• AutoFact: Chloroplast light-harvesting chlorophyll-a/b binding protein n=1 Tax=Ankistrodesmus convolutus RepID=C4P6Y3_9CHLO 5.0e-19
• FL-Next: tr=Chlorophyll a/b-binding protein; Pinus thunbergii (Japanese black pine) (Pinus thunbergiana). 0.0
• Sma3: LHCP 0.0
N-terminus
sp_v3.0_unigene120684 SustainPine v3.0 213
• AutoFact: Photosystem II CP43 chlorophyll apoprotein n=1 Tax=Arabidopsis lyrata subsp. lyrata RepID=D7KUZ9_ARALL 7.0e-30
• FL-Next: sp=Photosystem II CP43 chlorophyll apoprotein; Pinus heldreichii. Plastid; Chloroplast. 0.0
• Sma3: Photosystem II CP43 chlorophyll apoprotein 6.725e-30
Internal
sp_v3.0_unigene127011 SustainPine v3.0 820
• AutoFact: Chlorophyll a-b binding protein 151, chloroplastic n=18 Tax=Magnoliophyta RepID=CB21_GOSHI 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: LHCP 4.278e-31
Complete
sp_v3.0_unigene127156 SustainPine v3.0 1214
• AutoFact: Type II chlorophyll a /b-binding protein n=3 Tax=Pinaceae RepID=Q02070_PINSY 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Chlorophyll A/B binding protein, putative 5.512e-17
Complete
sp_v3.0_unigene127445 SustainPine v3.0 1016
• AutoFact: chlorophyll a/b-binding protein [Pinus thunbergii] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: LHCP 7.591e-31
Misassembled
sp_v3.0_unigene128041 SustainPine v3.0 945
• AutoFact: Type II chlorophyll a /b-binding protein n=3 Tax=Pinaceae RepID=Q02070_PINSY 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Chlorophyll A/B binding protein, putative 5.65e-18
C-terminus
sp_v3.0_unigene131103 SustainPine v3.0 389
• AutoFact: Photosystem II 22 kDa protein n=1 Tax=Arabidopsis thaliana RepID=F4IEG8_ARATH 3.0e-19
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Chloroplast photosystem II 22 kDa PsbS protein psbS 2.121e-09
C-terminus
sp_v3.0_unigene131603 SustainPine v3.0 574
• AutoFact: Type III chlorophyll a /b-binding protein n=2 Tax=Pinaceae RepID=Q02071_PINSY 0.0
• FL-Next: tr=Type III chlorophyll a /b-binding protein; Pinus sylvestris (Scots pine). 0.0
• Sma3: Chloroplast light-harvesting complex I protein Lhca3 7.688e-16
Internal
sp_v3.0_unigene132995 SustainPine v3.0 449
• AutoFact: Major light-harvesting complex II protein m10 n=1 Tax=Chlamydomonas reinhardtii RepID=Q8S3U0_CHLRE 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: LHCP 2.464e-23
Internal
sp_v3.0_unigene135662 SustainPine v3.0 458
• AutoFact: Chlorophyll a-b binding protein 2 n=1 Tax=Zea mays RepID=B6SZ08_MAIZE 0.0
• FL-Next: tr=Chlorophyll a/b-binding protein; Pinus thunbergii (Japanese black pine) (Pinus thunbergiana). 0.0
• Sma3: LHCP 1.092e-30
Internal
sp_v3.0_unigene135740 SustainPine v3.0 264
• AutoFact: Chlorophyll a-b binding protein of LHCII n=2 Tax=Chlamydomonas RepID=Q9ZSJ4_CHLRE 1.0e-22
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: LHCP 4.256e-29
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain