Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: C-type lectin, conserved site

Term: IPR018378  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene108993 SustainPine v3.0 327
AutoFact: Os06g0654000 protein (Fragment) n=4 Tax=Oryza sativa RepID=Q0DAG6_ORYSJ 5.00264e-43
FL-Next: sp=Ubiquitin carboxyl-terminal hydrolase 19; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Putative ubiquitin-specific protease 3.756e-11
Internal
sp_v3.0_unigene111706 SustainPine v3.0 261
AutoFact: Putative Zea mays retrotransposon Opie-2 n=2 Tax=Oryza sativa Japonica Group RepID=Q8H7T1_ORYSJ 3.0e-25
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Retrotransposon protein, putative, Ty1-copia subclass 0.0
Internal
sp_v3.0_unigene114468 SustainPine v3.0 374
AutoFact: putative ubiquitin-specific protease 15 [Oryza sativa Japonica Group] dbj|BAD37542.1| putative ubiquitin-specific protease 15 [Oryza sativa Japonica Group] 3.0e-31
FL-Next: sp=Ubiquitin carboxyl-terminal hydrolase 15; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Cysteine-type endopeptidase, putative 4.761e-08
Internal
sp_v3.0_unigene114537 SustainPine v3.0 490
AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|O64766.1|PP185_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g35030, mitochondrial; Flags: Precursor gb|AAC12843.1| hypothetical protein [Arabidopsis thaliana] gb|A 1.99965e-42
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Pentatricopeptide repeat-containing protein, putative 2.725e-22
Internal
sp_v3.0_unigene121057 SustainPine v3.0 429
AutoFact: Gag/pol polyprotein n=1 Tax=Arabidopsis thaliana RepID=Q9C5V1_ARATH 6.99949e-42
FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
Sma3: Retrotransposon protein, putative, unclassified 2.659e-26
Putative C-terminus
sp_v3.0_unigene121679 SustainPine v3.0 376
AutoFact: ubiquitin carboxyl-terminal hydrolase 16 [Arabidopsis thaliana] sp|Q9SB51.1|UBP16_ARATH RecName: Full=Ubiquitin carboxyl-terminal hydrolase 16; AltName: Full=Deubiquitinating enzyme 16; Short=AtUBP16; AltName: Full=Ubiquitin thiolesterase 16; AltName: Ful 4.0e-13
FL-Next: sp=Ubiquitin carboxyl-terminal hydrolase 16; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Putative ubiquitin-specific protease 1.577e-08
N-terminus
sp_v3.0_unigene122056 SustainPine v3.0 898
AutoFact: fiber protein Fb2 [Gossypium barbadense] 5.0e-25
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Fiber protein Fb2 2.876e-15
N-terminus
sp_v3.0_unigene124093 SustainPine v3.0 380
AutoFact: vacuolar protein sorting 13C protein-like [Oryza sativa Japonica Group] dbj|BAD19586.1| vacuolar protein sorting 13C protein-like [Oryza sativa Japonica Group] 6.0e-18
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Internal
sp_v3.0_unigene124631 SustainPine v3.0 279
AutoFact: Retrotransposon protein, putative, unclassified n=2 Tax=Oryza sativa Japonica Group RepID=Q10GK7_ORYSJ 4.0e-25
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Retrotransposon protein, putative, Ty1-copia subclass 5.836e-30
Internal
sp_v3.0_unigene125159 SustainPine v3.0 150
AutoFact: pfam03094, Mlo, Mlo family 5.0e-13
FL-Next: sp=MLO protein homolog 1; Oryza sativa subsp. japonica (Rice). 0.0
Internal
sp_v3.0_unigene125644 SustainPine v3.0 460
AutoFact: Pentatricopeptide repeat-containing protein, putative n=1 Tax=Ricinus communis RepID=B9S4A9_RICCO 1.99965e-42
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Pentatricopeptide repeat-containing protein, putative 7.064e-27
Internal
sp_v3.0_unigene129906 SustainPine v3.0 377
AutoFact: Pentatricopeptide repeat-containing protein, putative n=1 Tax=Ricinus communis RepID=B9SRF1_RICCO 4.0e-29
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Pentatricopeptide repeat-containing protein, putative 8.653e-09
Internal
sp_v3.0_unigene130654 SustainPine v3.0 294
AutoFact: ubiquitin carboxyl-terminal hydrolase 18 [Arabidopsis thaliana] sp|Q67XW5.2|UBP18_ARATH RecName: Full=Ubiquitin carboxyl-terminal hydrolase 18; AltName: Full=Deubiquitinating enzyme 18; Short=AtUBP18; AltName: Full=Ubiquitin thiolesterase 18; AltName: Ful 8.0e-25
FL-Next: sp=Ubiquitin carboxyl-terminal hydrolase 18; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Putative ubiquitin-specific protease 3.187e-11
Internal
sp_v3.0_unigene130783 SustainPine v3.0 419
AutoFact: Di19 domain containing protein 7.0e-09
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene130843 SustainPine v3.0 430
AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q9LW63.1|PP251_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein At3g23330 dbj|BAB02277.1| unnamed protein product [Arabidopsis thaliana] gb|AEE76753.1| pentatric 4.0e-35
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Pentatricopeptide repeat-containing protein, putative 0.0
Putative N-terminus
sp_v3.0_unigene132623 SustainPine v3.0 337
AutoFact: Gag-pol polyprotein n=7 Tax=Glycine max RepID=Q84VH6_SOYBN 3.0e-29
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Retrotransposon protein, putative, Ty1-copia subclass 2.23395e-41
Putative N-terminus
sp_v3.0_unigene133349 SustainPine v3.0 456
AutoFact: Unassigned protein
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Sma3: Zinc finger, C3HC4 type family protein 1.569e-07
Internal
sp_v3.0_unigene133585 SustainPine v3.0 163
AutoFact: Di19 domain containing protein 2.0e-14
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Fiber protein Fb2 2.359e-08
Internal
sp_v3.0_unigene135418 SustainPine v3.0 323
AutoFact: Putative Zea mays retrotransposon Opie-2 n=2 Tax=Oryza sativa Japonica Group RepID=Q8H7T1_ORYSJ 2.0e-23
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Retrotransposon protein, putative, Ty1-copia subclass 1.992e-36
Internal
sp_v3.0_unigene137565 SustainPine v3.0 475
AutoFact: vesicle-associated membrane protein 727 [Arabidopsis thaliana] ref|NP_001078283.1| vesicle-associated membrane protein 727 [Arabidopsis thaliana] sp|Q9M376.1|VA727_ARATH RecName: Full=Vesicle-associated membrane protein 727; Short=AtVAMP727 emb|CAB71004.1 2.0e-10
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Vesicle-associated membrane protein, putative 5.329e-13
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain