Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: cytoskeleton organization

Term: GO:0007010  Help

Source: GO from Sma3

Ontology: Biological Process

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene66855 SustainPine v3.0 387
• AutoFact: Putative polyprotein, identical n=1 Tax=Solanum demissum RepID=Q6F2D6_SOLDE 7.0e-31
• FL-Next: tr=Putative polyprotein, identical; Solanum demissum (Wild potato). 0.0
• Sma3: Retrotransposon protein, putative, Ty3-gypsy subclass 9.80909e-45
Internal
sp_v3.0_unigene67165 SustainPine v3.0 345
• AutoFact: Polyprotein n=1 Tax=Sorghum bicolor RepID=Q9XE68_SORBI 3.0e-26
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Retrotransposon protein, putative, Ty3-gypsy subclass 6.713e-38
Putative Complete
sp_v3.0_unigene67587 SustainPine v3.0 335
• AutoFact: ORF333 n=1 Tax=Vitis vinifera RepID=B6VJW0_VITVI 4.0e-35
• FL-Next: sp=RNA-directed DNA polymerase homolog; berteroana). Mitochondrion. 0.0
• Sma3: Retrotransposon protein, putative, Ty3-gypsy subclass 3.39114e-43
N-terminus
sp_v3.0_unigene67911 SustainPine v3.0 372
• AutoFact: Putative polyprotein n=1 Tax=Oryza sativa Japonica Group RepID=Q6UUH7_ORYSJ 3.0e-29
• FL-Next: sp=RNA-directed DNA polymerase homolog; berteroana). Mitochondrion. 0.0
• Sma3: Retrotransposon protein, putative, Ty3-gypsy subclass 3.13e-34
N-terminus
sp_v3.0_unigene68016 SustainPine v3.0 375
• AutoFact: Retrotransposon protein, putative, Ty3-gypsy subclass n=1 Tax=Oryza sativa Japonica Group RepID=Q2R0G6_ORYSJ 5.0e-30
• FL-Next: tr=Retrotransposon protein, putative, Ty3-gypsy subclass; Oryza sativa subsp. japonica (Rice). 0.0
• Sma3: Retrotransposon protein, putative, Ty3-gypsy subclass 1.14094e-41
Internal
sp_v3.0_unigene69384 SustainPine v3.0 185
• AutoFact: Ammonium transporter 1 member 2 n=1 Tax=Solanum lycopersicum RepID=AMT12_SOLLC 2.0e-19
• FL-Next: sp=Ammonium transporter 1 member 2; Solanum lycopersicum (Tomato) (Lycopersicon esculentum). 0.0
• Sma3: Ammonium transporter 0.0
Internal
sp_v3.0_unigene69654 SustainPine v3.0 195
• AutoFact: Putative polyprotein n=2 Tax=Oryza sativa Japonica Group RepID=Q60DI2_ORYSJ 4.0e-15
• FL-Next: tr=Putative gag-pol polyprotein; Oryza sativa subsp. japonica (Rice). 0.0
• Sma3: Retrotransposon protein, putative, Ty3-gypsy subclass 2.626e-27
Internal
sp_v3.0_unigene71011 SustainPine v3.0 276
• AutoFact: retrotransposon protein [Beta vulgaris] 4.0e-16
• FL-Next: sp=RNA-directed DNA polymerase homolog; berteroana). Mitochondrion. 0.0
• Sma3: Retrotransposon protein, putative, Ty3-gypsy subclass 0.0
N-terminus
sp_v3.0_unigene71045 SustainPine v3.0 372
• AutoFact: Mutant gag-pol polyprotein n=2 Tax=Pisum sativum RepID=E7BQD6_PEA 2.0e-38
• FL-Next: sp=RNA-directed DNA polymerase homolog; berteroana). Mitochondrion. 0.0
• Sma3: Retrotransposon protein, putative, Ty3-gypsy subclass 1.129e-24
Putative N-terminus
sp_v3.0_unigene71056 SustainPine v3.0 327
• AutoFact: Gag-pol polyprotein n=3 Tax=Zea mays RepID=Q8L7J3_MAIZE 1.0e-34
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Retrotransposon protein, putative, Ty3-gypsy subclass 1.414e-22
Putative Complete
sp_v3.0_unigene71485 SustainPine v3.0 339
• AutoFact: Putative retrotransposon protein, identical n=2 Tax=Solanum demissum RepID=Q6L3S2_SOLDE 2.0e-29
• FL-Next: sp=RNA-directed DNA polymerase homolog; berteroana). Mitochondrion. 0.0
• Sma3: Retrotransposon protein, putative, Ty3-gypsy subclass 4.475e-27
Putative N-terminus
sp_v3.0_unigene71772 SustainPine v3.0 406
• AutoFact: Retrotransposon protein, putative, Ty3-gypsy subclass n=2 Tax=Poaceae RepID=Q2QUR6_ORYSJ 2.0e-35
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Retrotransposon protein, putative, Ty3-gypsy subclass 3.53899e-40
Putative Complete
sp_v3.0_unigene71795 SustainPine v3.0 281
• AutoFact: Pol protein n=1 Tax=Cucumis melo subsp. melo RepID=Q84KB0_CUCME 5.0e-24
• FL-Next: sp=RNA-directed DNA polymerase homolog; berteroana). Mitochondrion. 0.0
• Sma3: Retrotransposon protein, putative, Ty3-gypsy subclass 3.421e-40
Putative N-terminus
sp_v3.0_unigene73453 SustainPine v3.0 257
• AutoFact: CRAL_TRIO domain containing protein 7.0e-05
• FL-Next: sp=Patellin-4; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: Patellin-5 7.801e-13
Internal
sp_v3.0_unigene73621 SustainPine v3.0 293
• AutoFact: Gag-pol polyprotein n=1 Tax=Silene latifolia RepID=E7BQD4_SILLA 2.0e-35
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Retrotransposon protein, putative, Ty3-gypsy subclass 1.451e-16
Putative Complete
sp_v3.0_unigene74107 SustainPine v3.0 475
• AutoFact: Profilin n=9 Tax=Pinaceae RepID=A9NNS7_PICSI 5.0e-35
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Profilin 0.0
Internal
sp_v3.0_unigene74454 SustainPine v3.0 191
• AutoFact: Villin-4 n=4 Tax=Arabidopsis RepID=VILI4_ARATH 9.0e-08
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene76157 SustainPine v3.0 357
• AutoFact: Reverse transcriptase (Fragment) n=1 Tax=Taxus baccata RepID=Q56GF5_TAXBA 6.0e-33
• FL-Next: sp=RNA-directed DNA polymerase homolog; berteroana). Mitochondrion. 0.0
• Sma3: Retrotransposon protein, putative, Ty3-gypsy subclass 4.832e-19
Putative N-terminus
sp_v3.0_unigene78112 SustainPine v3.0 294
• AutoFact: Fragmin60 n=1 Tax=Physarum polycephalum RepID=Q9GSL1_PHYPO 3.0e-32
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative villin 3.655e-08
Internal
sp_v3.0_unigene78342 SustainPine v3.0 243
• AutoFact: Profilin n=1 Tax=Picea sitchensis RepID=A9NMR7_PICSI 4.0e-25
• FL-Next: sp=Profilin; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Profilin 0.0
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain