Sustainpine_db
HomeAssembliesBLASTSearchInstitutions

Assembly Name: SustainPine v3.0

Name: actin binding

Term: GO:0003779  Help

Source: GO from Sma3

Ontology: Molecular Function


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene185845 SustainPine v3.0 245
AutoFact: Strong similarity to F22O13.22 gi|3063460 myosin homolog from A. thaliana BAC gb|AC003981 [Arabidopsis thaliana] 3.0e-19
FL-Next: tr=Myosin XI; Marchantia polymorpha (Liverwort) (Marchantia aquatica). 0.0
Sma3: Myosin XI, putative 9.796e-13
Putative C-terminus
sp_v3.0_unigene186066 SustainPine v3.0 286
AutoFact: pfam00241, Cofilin_ADF, Cofilin/tropomyosin-type actin-binding protein 3.0e-31
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene186244 SustainPine v3.0 587
AutoFact: Actin related protein 2 n=1 Tax=Selaginella moellendorffii RepID=D8S0E5_SELML 0.0
FL-Next: tr=Actin; Picea rubens (Red spruce) (Picea australis). 0.0
Sma3: Actin-related protein 2 5.087e-09
N-terminus
sp_v3.0_unigene186414 SustainPine v3.0 535
AutoFact: FH2 domain containing protein 1.4013e-45
FL-Next: sp=Formin-like protein 3; Oryza sativa subsp. japonica (Rice). 0.0
Putative C-terminus
sp_v3.0_unigene187222 SustainPine v3.0 507
AutoFact: RNA-directed DNA polymerase (Reverse transcriptase); Chromo; Zinc finger, CCHC-type; Peptidase aspartic, active site; Polynucleotidyl transferase, Ribonuclease H fold n=1 Tax=Medicago truncatula RepID=A2Q2C7_MEDTR 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Retrotransposon protein, putative, Ty3-gypsy subclass 2.47105e-41
Putative Complete
sp_v3.0_unigene188987 SustainPine v3.0 702
AutoFact: non-specific phospholipase C6 [Arabidopsis thaliana] dbj|BAC22511.1| phosphatidylglycerol specific phospholipase C [Arabidopsis thaliana] gb|AEE78437.1| non-specific phospholipase C6 [Arabidopsis thaliana] 2.0e-40
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Phosphatidylglycerol specific phospholipase C 5.899e-16
C-terminus
sp_v3.0_unigene189889 SustainPine v3.0 495
AutoFact: RVT_1 domain containing protein 2.0e-15
FL-Next: sp=RNA-directed DNA polymerase homolog; berteroana). Mitochondrion. 0.0
Sma3: Retrotransposon protein, putative, Ty3-gypsy subclass 8.173e-15
C-terminus
sp_v3.0_unigene191269 SustainPine v3.0 499
AutoFact: pfam00241, Cofilin_ADF, Cofilin/tropomyosin-type actin-binding protein 4.0e-36
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene191581 SustainPine v3.0 379
AutoFact: Myosin XI, putative n=1 Tax=Ricinus communis RepID=B9RWS3_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Sma3: Myosin XI 1.207e-24
Internal
sp_v3.0_unigene192915 SustainPine v3.0 666
AutoFact: Actin-related protein 2 n=32 Tax=Euteleostomi RepID=ARP2_HUMAN 0.0
FL-Next: tr=Actin 4; Picea abies (Norway spruce) (Picea excelsa). 0.0
Sma3: Actin 4.37e-11
C-terminus
sp_v3.0_unigene199726 SustainPine v3.0 294
AutoFact: Probable SAC6-actin filament bundling protein, fimbrin n=2 Tax=Ustilaginaceae RepID=E6ZR66_9BASI 2.0e-18
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Fimbrin, putative 5.391e-13
Putative N-terminus
sp_v3.0_unigene200407 SustainPine v3.0 516
AutoFact: Actin-related protein 3 n=1 Tax=Acanthamoeba castellanii RepID=ARP3_ACACA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Actin-related protein 3 2.397e-12
C-terminus
sp_v3.0_unigene203159 SustainPine v3.0 513
AutoFact: myosin VIII ZMM3 [Zea mays] 3.0e-17
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Sma3: Myosin 2.202e-10
Putative N-terminus
sp_v3.0_unigene203402 SustainPine v3.0 464
AutoFact: pfam00241, Cofilin_ADF, Cofilin/tropomyosin-type actin-binding protein 9.94922e-44
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene204998 SustainPine v3.0 440
AutoFact: pfam00241, Cofilin_ADF, Cofilin/tropomyosin-type actin-binding protein 2.0e-40
FL-Next: tr=Predicted protein; Hordeum vulgare var. distichum (Two-rowed barley). 0.0
Sma3: cDNA clone:J023134C12, full insert sequence 6.823e-06
Complete
sp_v3.0_unigene205626 SustainPine v3.0 233
AutoFact: Extensin_2 multi-domain protein 8.0e-25
Sma3: Extensin 0.0
coding
sp_v3.0_unigene205725 SustainPine v3.0 467
AutoFact: Profilin-A n=1 Tax=Physarum polycephalum RepID=PROF1_PHYPO 2.0e-37
FL-Next: sp=Profilin-3; Ambrosia artemisiifolia (Short ragweed). 0.0
Sma3: Profilin 4.336e-17
Complete
sp_v3.0_unigene205871 SustainPine v3.0 447
AutoFact: Profilin-2 n=1 Tax=Acanthamoeba castellanii RepID=PROF2_ACACA 0.0
FL-Next: sp=Profilin; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Pollen allergen Par j 3.0101 9.747e-06
Complete
sp_v3.0_unigene206575 SustainPine v3.0 504
AutoFact: Actophorin n=1 Tax=Acanthamoeba castellanii RepID=ACTP_ACACA 0.0
FL-Next: sp=Actin-depolymerizing factor 6; Oryza sativa subsp. japonica (Rice). 0.0
Sma3: Actin-depolymerizing factor 6.018e-14
Complete
sp_v3.0_unigene206837 SustainPine v3.0 525
AutoFact: Actophorin n=1 Tax=Acanthamoeba castellanii RepID=ACTP_ACACA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Actin-depolymerizing factor 1.737e-24
Complete

Go to Annotations List

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain