Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: plant-type cell wall

Term: GO:0009505  Help

Source: GO from Sma3

Ontology: Cellular Component

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene17222 SustainPine v3.0 1358
• AutoFact: Peroxidase-like protein (Fragment) n=14 Tax=Picea sitchensis RepID=E0Z9M2_PICSI 0.0
• FL-Next: sp=Peroxidase 12; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: Peroxidase 0.0
Complete
sp_v3.0_unigene17320 SustainPine v3.0 1161
• AutoFact: Xyloglucan endotransglycosylase n=2 Tax=Asteroideae RepID=D9I0J0_DAHPI 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Xyloglucan endotransglycosylase 1.28303e-41
Complete
sp_v3.0_unigene17335 SustainPine v3.0 1441
• AutoFact: xyloglucan endotransglycosylase/hydrolase precursor XTH-30 [Populus tremula] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Xyloglucan endotransglycosylase 4.258e-39
Complete
sp_v3.0_unigene17398 SustainPine v3.0 1922
• AutoFact: Sucrose synthase n=1 Tax=Pinus taeda RepID=A6N837_PINTA 0.0
• FL-Next: tr=Sucrose synthase; Pinus taeda (Loblolly pine). 0.0
• Sma3: Sucrose synthase 0.0
C-terminus
sp_v3.0_unigene17400 SustainPine v3.0 1219
• AutoFact: Atrophin-1 multi-domain protein 1.0e-18
• Sma3: Extensin 1.784e-30
coding
sp_v3.0_unigene17430 SustainPine v3.0 896
• AutoFact: Pollen allergen CJP38 n=1 Tax=Cryptomeria japonica RepID=Q588B8_CRYJA 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Beta-1,3-glucanase 0.0
C-terminus
sp_v3.0_unigene17445 SustainPine v3.0 1448
• AutoFact: flocculin [Trichomonas vaginalis G3] gb|EAX95321.1| flocculin, putative [Trichomonas vaginalis G3] 7.0e-15
• FL-Next: sp=DNA-directed RNA polymerase II subunit RPB1; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: Extensin 1.447e-36
Putative C-terminus
sp_v3.0_unigene17447 SustainPine v3.0 959
• AutoFact: Sucrose synthase n=1 Tax=Pinus taeda RepID=A6N837_PINTA 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Sucrose synthase 0.0
Putative Complete
sp_v3.0_unigene17468 SustainPine v3.0 1394
• AutoFact: RecName: Full=Acid phosphatase 1; AltName: Full=Apase-1(1); Flags: Precursor gb|AAA34134.1| acid phosphatase type 1 precursor [Solanum lycopersicum] gb|AAA34135.1| acid phosphatase type 5 [Solanum lycopersicum] emb|CAA39370.1| acid phosphatase [Solanum ly 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative acid phosphatase 1.234e-25
Complete
sp_v3.0_unigene17510 SustainPine v3.0 1688
• AutoFact: Exo-beta-glucanase n=1 Tax=Lilium longiflorum RepID=Q6UY81_LILLO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Beta-D-glucan exohydrolase-like protein 6.769e-21
C-terminus
sp_v3.0_unigene17543 SustainPine v3.0 3060
• AutoFact: calnexin-like protein [Solanum lycopersicum] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Calnexin 2.105e-15
Misassembled
sp_v3.0_unigene17596 SustainPine v3.0 1875
• AutoFact: Os01g0883900 protein n=3 Tax=Oryza sativa RepID=Q0JH49_ORYSJ 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: ATP binding protein, putative 9.634e-24
C-terminus
sp_v3.0_unigene17607 SustainPine v3.0 1703
• AutoFact: pfam00332, Glyco_hydro_17, Glycosyl hydrolases family 17 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Glucan endo-1,3-beta-glucosidase, putative 7.509e-17
Complete
sp_v3.0_unigene17613 SustainPine v3.0 815
• AutoFact: alpha-galactosidase [Helianthus annuus] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Alpha-galactosidase 3.50325e-44
C-terminus
sp_v3.0_unigene17666 SustainPine v3.0 880
• AutoFact: Drf_FH1 multi-domain protein 9.0e-21
• Sma3: Extensin 2.055e-36
coding
sp_v3.0_unigene17705 SustainPine v3.0 967
• AutoFact: Expansin 1 n=1 Tax=Musa acuminata RepID=Q8RVK4_MUSAC 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Expansin 0.0
Putative Complete
sp_v3.0_unigene17712 SustainPine v3.0 1934
• AutoFact: strictosidine synthase-like 3 [Arabidopsis thaliana] gb|AAL31926.1|AF419594_1 At1g08470/T27G7_9 [Arabidopsis thaliana] gb|AAL36403.1| unknown protein [Arabidopsis thaliana] gb|AAM51389.1| unknown protein [Arabidopsis thaliana] gb|AEE28296.1| strictosidine 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative strictosidine synthase 6.415e-26
Complete
sp_v3.0_unigene17721 SustainPine v3.0 1246
• AutoFact: Xyloglucan endotransglucosylase/hydrolase protein 9, putative n=1 Tax=Ricinus communis RepID=B9S9N2_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Xyloglucan endotransglycosylase 3.581e-39
Complete
sp_v3.0_unigene17728 SustainPine v3.0 1580
• AutoFact: Alpha-galactosidase 1 n=1 Tax=Pisum sativum RepID=Q5ZP79_PEA 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Alpha-galactosidase 0.0
Complete
sp_v3.0_unigene17813 SustainPine v3.0 1734
• AutoFact: Alpha-galactosidase n=1 Tax=Phaseolus vulgaris RepID=Q41100_PHAVU 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Alpha-galactosidase 0.0
Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain