|
Sequence
|
Assembly
|
Length (nt)
|
|
Full-Length
|
|
sp_v3.0_unigene98909
|
SustainPine v3.0
|
521
|
|
• AutoFact: Retrotransposon protein, putative, unclassified n=1 Tax=Oryza sativa Japonica Group RepID=Q2QLK1_ORYSJ
|
2.0e-35
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Sma3: Retrotransposon protein, putative, Ty1-copia subclass
|
5.518e-08
|
|
N-terminus
|
|
sp_v3.0_unigene99003
|
SustainPine v3.0
|
856
|
|
• AutoFact: Copia-type polyprotein, putative n=4 Tax=Arabidopsis thaliana RepID=Q9C739_ARATH
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Sma3: Retrotransposon protein, putative, Ty1-copia subclass
|
1.428e-14
|
|
Putative C-terminus
|
|
sp_v3.0_unigene100586
|
SustainPine v3.0
|
283
|
|
• AutoFact: Unassigned protein
|
6.0e-23
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
Internal
|
|
sp_v3.0_unigene103358
|
SustainPine v3.0
|
667
|
|
• AutoFact: Copia-type polyprotein, putative n=4 Tax=Arabidopsis thaliana RepID=Q9C739_ARATH
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Sma3: Retrotransposon protein, putative, unclassified
|
5.419e-26
|
|
Putative C-terminus
|
|
sp_v3.0_unigene104413
|
SustainPine v3.0
|
667
|
|
• AutoFact: Ubiquitin specific protease 12 n=1 Tax=Nicotiana tabacum RepID=B6V765_TOBAC
|
0.0
|
|
• FL-Next: sp=Ubiquitin carboxyl-terminal hydrolase 12; Arabidopsis thaliana (Mouse-ear cress).
|
0.0
|
|
• Sma3: Ubiquitin carboxyl-terminal hydrolase, putative
|
9.986e-07
|
|
Internal
|
|
sp_v3.0_unigene106367
|
SustainPine v3.0
|
647
|
|
• AutoFact: Putative gag-pol polyprotein, identical n=1 Tax=Solanum demissum RepID=Q6L3N8_SOLDE
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Sma3: Copia-type polyprotein
|
7.888e-11
|
|
Internal
|
|
sp_v3.0_unigene107085
|
SustainPine v3.0
|
500
|
|
• AutoFact: Integrase n=1 Tax=Cucumis melo subsp. melo RepID=A6YTD9_CUCME
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Sma3: Retrotransposon protein, putative, Ty1-copia subclass
|
3.194e-27
|
|
Internal
|
|
sp_v3.0_unigene108389
|
SustainPine v3.0
|
556
|
|
• AutoFact: ubiquitin carboxyl-terminal hydrolase 12 [Arabidopsis thaliana] gb|AAK25908.1|AF360198_1 putative ubiquitin-specific protease UBP12 [Arabidopsis thaliana] gb|AAN13185.1| putative ubiquitin-specific protease UBP12 [Arabidopsis thaliana] gb|AED91040.1| ubiq
|
4.0e-38
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Sma3: Ubiquitin carboxyl-terminal hydrolase, putative
|
1.022e-06
|
|
Putative Complete
|
|
sp_v3.0_unigene108465
|
SustainPine v3.0
|
569
|
|
• AutoFact: Copia-type polyprotein, putative n=1 Tax=Arabidopsis thaliana RepID=Q9C536_ARATH
|
5.0e-37
|
|
• FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca).
|
0.0
|
|
• Sma3: Copia-type polyprotein
|
8.05e-11
|
|
Putative C-terminus
|
|
sp_v3.0_unigene109440
|
SustainPine v3.0
|
272
|
|
• AutoFact: CCT motif family protein [Arabidopsis thaliana] gb|AAV68883.1| hypothetical protein AT5G41380 [Arabidopsis thaliana] gb|AAX23921.1| hypothetical protein At5g41380 [Arabidopsis thaliana] gb|AED94671.1| CCT motif family protein [Arabidopsis thaliana]
|
4.0e-06
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
Internal
|
|
sp_v3.0_unigene110676
|
SustainPine v3.0
|
541
|
|
• AutoFact: Putative retroelement pol polyprotein n=1 Tax=Arabidopsis thaliana RepID=Q9ZQE9_ARATH
|
2.8026e-45
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Sma3: Retrotransposon protein, putative, Ty1-copia subclass
|
7.175e-31
|
|
Internal
|
|
sp_v3.0_unigene111706
|
SustainPine v3.0
|
261
|
|
• AutoFact: Putative Zea mays retrotransposon Opie-2 n=2 Tax=Oryza sativa Japonica Group RepID=Q8H7T1_ORYSJ
|
3.0e-25
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Sma3: Retrotransposon protein, putative, Ty1-copia subclass
|
0.0
|
|
Internal
|
|
sp_v3.0_unigene112912
|
SustainPine v3.0
|
538
|
|
• AutoFact: Gag-pol polyprotein, putative [Solanum demissum]
|
4.99997e-41
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Sma3: Retrotransposon protein, putative, Ty1-copia subclass
|
3.144e-11
|
|
Putative C-terminus
|
|
sp_v3.0_unigene124631
|
SustainPine v3.0
|
279
|
|
• AutoFact: Retrotransposon protein, putative, unclassified n=2 Tax=Oryza sativa Japonica Group RepID=Q10GK7_ORYSJ
|
4.0e-25
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Sma3: Retrotransposon protein, putative, Ty1-copia subclass
|
5.836e-30
|
|
Internal
|
|
sp_v3.0_unigene125116
|
SustainPine v3.0
|
437
|
|
• AutoFact: Polyprotein n=1 Tax=Oryza sativa Japonica Group RepID=Q8W153_ORYSJ
|
9.0e-33
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Sma3: Retrotransposon protein, putative, Ty1-copia subclass
|
3.351e-18
|
|
Putative N-terminus
|
|
sp_v3.0_unigene128050
|
SustainPine v3.0
|
719
|
|
• AutoFact: putative ubiquitin carboxyl-terminal hydrolase [Arabidopsis thaliana]
|
0.0
|
|
• FL-Next: sp=Ubiquitin carboxyl-terminal hydrolase 13; Arabidopsis thaliana (Mouse-ear cress).
|
0.0
|
|
• Sma3: Ubiquitin carboxyl-terminal hydrolase
|
5.848e-07
|
|
Internal
|
|
sp_v3.0_unigene128640
|
SustainPine v3.0
|
719
|
|
• AutoFact: Retrotransposon protein, putative, unclassified n=1 Tax=Oryza sativa Japonica Group RepID=Q2QXM6_ORYSJ
|
0.0
|
|
• FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca).
|
0.0
|
|
• Sma3: Retrotransposon protein, putative, unclassified
|
3.79e-29
|
|
Putative C-terminus
|
|
sp_v3.0_unigene129508
|
SustainPine v3.0
|
358
|
|
• AutoFact: Gag-pol polyprotein, putative n=1 Tax=Solanum demissum RepID=Q6L3Y5_SOLDE
|
5.0e-29
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Sma3: Retrotransposon protein, putative, unclassified
|
5.819e-11
|
|
C-terminus
|
|
sp_v3.0_unigene132548
|
SustainPine v3.0
|
656
|
|
• AutoFact: Copia-type reverse transcriptase-like protein n=1 Tax=Arabidopsis thaliana RepID=Q9M197_ARATH
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Sma3: Retrotransposon protein, putative, Ty1-copia subclass
|
8.606e-23
|
|
N-terminus
|
|
sp_v3.0_unigene138730
|
SustainPine v3.0
|
284
|
|
• AutoFact: Unassigned protein
|
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Sma3: Copia-type polyprotein
|
1.635e-10
|
|
Putative C-terminus
|
