Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: CCT domain

Term: IPR010402  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene58745 SustainPine v3.0 238
AutoFact: putative ubiquitin protease [Oryza sativa Indica Group] 2.0e-18
FL-Next: sp=Ubiquitin carboxyl-terminal hydrolase 13; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Ubiquitin carboxyl-terminal hydrolase, putative 7.14e-07
Internal
sp_v3.0_unigene59658 SustainPine v3.0 238
AutoFact: ubiquitin carboxyl-terminal hydrolase [Arabidopsis thaliana] 2.0e-27
FL-Next: Isoform 2 of Ubiquitin carboxyl-terminal hydrolase 12 OS=Arabidopsis thaliana GN=UBP12 0.0
Sma3: Ubiquitin carboxyl-terminal hydrolase, putative 9.059e-07
Internal
sp_v3.0_unigene59702 SustainPine v3.0 324
AutoFact: CCT multi-domain protein 4.0e-08
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: GATA transcription factor 25 5.444e-11
Putative C-terminus
sp_v3.0_unigene60605 SustainPine v3.0 247
AutoFact: Integrase n=1 Tax=Cucumis melo subsp. melo RepID=A6YTD9_CUCME 8.0e-16
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene62177 SustainPine v3.0 174
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene65505 SustainPine v3.0 129
AutoFact: zinc finger protein CONSTANS-LIKE 9 [Arabidopsis thaliana] ref|NP_974250.1| zinc finger protein CONSTANS-LIKE 9 [Arabidopsis thaliana] ref|NP_001030659.1| zinc finger protein CONSTANS-LIKE 9 [Arabidopsis thaliana] ref|NP_001118599.1| zinc finger protein C 4.0e-11
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene67281 SustainPine v3.0 419
AutoFact: Putative copia-type polyprotein n=1 Tax=Oryza sativa Japonica Group RepID=Q9FWI2_ORYSJ 8.0e-28
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Retrotransposon protein, putative, unclassified 1.3e-15
Putative N-terminus
sp_v3.0_unigene67497 SustainPine v3.0 322
AutoFact: Reverse transcriptase (Fragment) n=1 Tax=Picea abies RepID=Q9FY10_PICAB 7.0e-29
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Retrotransposon protein, putative, Ty1-copia subclass 5.17079e-43
Internal
sp_v3.0_unigene68272 SustainPine v3.0 275
AutoFact: ubiquitin carboxyl-terminal hydrolase 12 [Arabidopsis thaliana] gb|AAK25908.1|AF360198_1 putative ubiquitin-specific protease UBP12 [Arabidopsis thaliana] gb|AAN13185.1| putative ubiquitin-specific protease UBP12 [Arabidopsis thaliana] gb|AED91040.1| ubiq 9.0e-05
FL-Next: Isoform 2 of Ubiquitin carboxyl-terminal hydrolase 12 OS=Arabidopsis thaliana GN=UBP12 0.0
N-terminus
sp_v3.0_unigene70821 SustainPine v3.0 337
AutoFact: putative ubiquitin-specific protease [Oryza sativa Japonica Group] 1.00053e-42
FL-Next: sp=Ubiquitin carboxyl-terminal hydrolase 12; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Ubiquitin carboxyl-terminal hydrolase 3.082e-09
Internal
sp_v3.0_unigene72693 SustainPine v3.0 225
AutoFact: Unassigned protein 9.0e-29
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative N-terminus
sp_v3.0_unigene74063 SustainPine v3.0 363
AutoFact: Ubiquitin carboxyl-terminal hydrolase 7 n=1 Tax=Camponotus floridanus RepID=E2B1Q7_9HYME 0.0
FL-Next: Isoform 2 of Ubiquitin carboxyl-terminal hydrolase 12 OS=Arabidopsis thaliana GN=UBP12 0.0
Sma3: Ubiquitin carboxyl-terminal hydrolase, putative 8.25e-07
Internal
sp_v3.0_unigene74451 SustainPine v3.0 210
AutoFact: ubiquitin carboxyl-terminal hydrolase 12 [Arabidopsis thaliana] gb|AAK25908.1|AF360198_1 putative ubiquitin-specific protease UBP12 [Arabidopsis thaliana] gb|AAN13185.1| putative ubiquitin-specific protease UBP12 [Arabidopsis thaliana] gb|AED91040.1| ubiq 6.0e-17
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative C-terminus
sp_v3.0_unigene76050 SustainPine v3.0 465
AutoFact: CCT domain containing protein 7.0e-18
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Sma3: Zinc finger protein CONSTANS-LIKE 16 2.06e-08
Complete
sp_v3.0_unigene76074 SustainPine v3.0 376
AutoFact: Putative gag-pol polyprotein, identical n=1 Tax=Solanum demissum RepID=Q6L3N8_SOLDE 3.0e-24
FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
Sma3: Retrotransposon protein, putative, Ty1-copia subclass 5.069e-13
Putative C-terminus
sp_v3.0_unigene78899 SustainPine v3.0 455
AutoFact: CCT motif-containing protein [Arabidopsis thaliana] gb|ABE65597.1| zinc finger CONSTANS-like protein [Arabidopsis thaliana] dbj|BAH30269.1| hypothetical protein [Arabidopsis thaliana] gb|AEE27705.1| CCT motif-containing protein [Arabidopsis thaliana] 5.0e-05
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene81718 SustainPine v3.0 402
AutoFact: Putative gag-pol polyprotein, identical n=1 Tax=Solanum demissum RepID=Q6L3N8_SOLDE 5.0e-32
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Retrotransposon protein, putative, Ty1-copia subclass 8.318e-17
Putative C-terminus
sp_v3.0_unigene96410 SustainPine v3.0 416
AutoFact: Unassigned protein 2.0e-17
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene98597 SustainPine v3.0 684
AutoFact: Os07g0434200 protein (Fragment) n=2 Tax=Oryza sativa RepID=Q0D6W3_ORYSJ 2.0e-29
FL-Next: sp=Retrovirus-related Pol polyprotein from transposon TNT 1-94; Nicotiana tabacum (Common tobacco). 0.0
Sma3: Retrotransposon protein, putative, unclassified 3.519e-11
C-terminus
sp_v3.0_unigene98630 SustainPine v3.0 680
AutoFact: Os07g0434200 protein (Fragment) n=2 Tax=Oryza sativa RepID=Q0D6W3_ORYSJ 9.0e-35
FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
Sma3: Retrotransposon protein, putative, Ty1-copia subclass 9.741e-07
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain