Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: endonuclease activity

Term: GO:0004519  Help

Source: GO from Sma3

Ontology: Molecular Function


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene207308 SustainPine v3.0 537
AutoFact: rve domain containing protein 4.0e-14
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Retrotransposon protein, putative, Ty1-copia subclass 6.179e-11
Internal
sp_v3.0_unigene207325 SustainPine v3.0 451
AutoFact: rve domain containing protein 1.0e-23
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Retrotransposon protein, putative, Ty1-copia subclass 2.039e-18
Internal
sp_v3.0_unigene207330 SustainPine v3.0 615
AutoFact: rve domain containing protein 1.0e-13
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene207339 SustainPine v3.0 432
AutoFact: rve domain containing protein 4.0e-05
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Retrotransposon protein, putative, Ty1-copia subclass 3.436e-09
Internal
sp_v3.0_unigene207370 SustainPine v3.0 357
AutoFact: Polyprotein n=2 Tax=Primula vulgaris RepID=A5X2S4_9ERIC 1.0e-31
FL-Next: sp=Uncharacterized mitochondrial protein AtMg00860; Arabidopsis thaliana (Mouse-ear cress). Mitochondrion. 0.0
Sma3: Retrotransposon protein, putative, unclassified 6.093e-16
Putative C-terminus
sp_v3.0_unigene207374 SustainPine v3.0 319
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene207399 SustainPine v3.0 464
AutoFact: Retrotransposon protein, putative, unclassified n=2 Tax=Oryza sativa RepID=Q10RT1_ORYSJ 1.4013e-45
FL-Next: sp=Uncharacterized mitochondrial protein AtMg00860; Arabidopsis thaliana (Mouse-ear cress). Mitochondrion. 0.0
Sma3: Polyprotein 1.889e-16
Putative C-terminus
sp_v3.0_unigene207410 SustainPine v3.0 597
AutoFact: OSJNBa0041A02.23 protein n=2 Tax=Oryza sativa Japonica Group RepID=Q7XTQ1_ORYSJ 2.0e-27
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
C-terminus
sp_v3.0_unigene207417 SustainPine v3.0 266
AutoFact: Retrotransposon protein, putative, unclassified n=2 Tax=Oryza sativa RepID=Q10RT1_ORYSJ 2.0e-25
FL-Next: sp=Uncharacterized mitochondrial protein AtMg00860; Arabidopsis thaliana (Mouse-ear cress). Mitochondrion. 0.0
Sma3: Polyprotein 8.062e-13
Putative C-terminus
sp_v3.0_unigene207495 SustainPine v3.0 1228
AutoFact: RNA-directed DNA polymerase (Reverse transcriptase); Chromo; Zinc finger, CCHC-type; Peptidase aspartic, active site; Polynucleotidyl transferase, Ribonuclease H fold n=1 Tax=Medicago truncatula RepID=A2Q2C7_MEDTR 1.0e-31
FL-Next: sp=Uncharacterized mitochondrial protein AtMg00860; Arabidopsis thaliana (Mouse-ear cress). Mitochondrion. 0.0
Sma3: Polyprotein 1.349e-16
C-terminus
sp_v3.0_unigene207598 SustainPine v3.0 398
AutoFact: Putative gag-pol polyprotein, identical n=1 Tax=Solanum demissum RepID=Q6L3N8_SOLDE 4.0e-36
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Retrotransposon protein, putative, Ty1-copia subclass 1.707e-11
Internal
sp_v3.0_unigene207764 SustainPine v3.0 592
AutoFact: similar to FLAP endonuclease-1 (SW:P39748) [Arabidopsis thaliana] 2.0e-21
FL-Next: sp=Flap endonuclease 1-B; Physcomitrella patens subsp. patens (Moss). 0.0
Sma3: Flap endonuclease 1a 4.233e-09
Internal
sp_v3.0_unigene208540 SustainPine v3.0 852
AutoFact: IQ-domain 6 protein [Arabidopsis thaliana] gb|AAC14531.1| putative SF16 protein {Helianthus annuus} [Arabidopsis thaliana] gb|ABM06004.1| At2g26180 [Arabidopsis thaliana] gb|AEC07805.1| IQ-domain 6 protein [Arabidopsis thaliana] 7.0e-15
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Calmodulin binding protein 2.259e-26
Putative N-terminus
sp_v3.0_unigene208683 SustainPine v3.0 407
AutoFact: transcriptional activator DEMETER [Arabidopsis thaliana] sp|Q8LK56.2|DME_ARATH RecName: Full=Transcriptional activator DEMETER; AltName: Full=DNA glycosylase-related protein DME gb|ABC61677.1| DNA glycosylase DEMETER [Arabidopsis thaliana] gb|AED90761.1| 5.60519e-45
FL-Next: Isoform 2 of Transcriptional activator DEMETER OS=Arabidopsis thaliana GN=DME 0.0
Sma3: Repressor of silencing 1 1.514e-08
Internal
sp_v3.0_unigene209049 SustainPine v3.0 515
AutoFact: vacuolar ATP synthase [Oryza sativa Indica Group] 2.0e-28
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Leucine-rich repeat protein 6.474e-18
C-terminus
sp_v3.0_unigene209222 SustainPine v3.0 282
AutoFact: CCR4-NOT transcription complex subunit 6 n=1 Tax=Zea mays RepID=B6SJQ2_MAIZE 3.0e-20
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Misassembled

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain