Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: translational elongation

Term: GO:0006414  Help

Source: GO from Sma3

Ontology: Biological Process


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene759 SustainPine v3.0 1985
AutoFact: Elongation factor 1-gamma n=1 Tax=Prunus avium RepID=EF1G_PRUAV 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene2465 SustainPine v3.0 1573
AutoFact: RecName: Full=60S acidic ribosomal protein P0 gb|AAB63814.1| acidic ribosomal protein P0 [Glycine max] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Predicted protein 0.0
Complete
sp_v3.0_unigene4533 SustainPine v3.0 1327
AutoFact: Putative elongation factor n=1 Tax=Cryptomeria japonica RepID=Q1XG58_CRYJA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Elongation factor 1-delta 1 2.721e-14
Complete
sp_v3.0_unigene4615 SustainPine v3.0 945
AutoFact: Elongation factor 1-alpha n=193 Tax=Eukaryota RepID=EF1A_ARATH 0.0
FL-Next: sp=Elongation factor 1-alpha; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Elongation factor 1-alpha 0.0
N-terminus
sp_v3.0_unigene5618 SustainPine v3.0 1464
AutoFact: Elongation factor P n=3 Tax=Andropogoneae RepID=B6TAH3_MAIZE 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene6366 SustainPine v3.0 3087
AutoFact: non-specific phospholipase C6 [Arabidopsis thaliana] dbj|BAC22511.1| phosphatidylglycerol specific phospholipase C [Arabidopsis thaliana] gb|AEE78437.1| non-specific phospholipase C6 [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Phosphatidylglycerol specific phospholipase C 1.228e-21
Complete
sp_v3.0_unigene6926 SustainPine v3.0 1365
AutoFact: elongation factor Ts family protein [Arabidopsis thaliana] emb|CAB43920.1| putative protein [Arabidopsis thaliana] emb|CAB79664.1| putative protein [Arabidopsis thaliana] gb|AAL10483.1| AT4g29060/F19B15_90 [Arabidopsis thaliana] gb|AEE85580.1| elongation 0.0
FL-Next: sp=Elongation factor Ts, chloroplastic; Rhodomonas salina (Cryptomonas salina). Plastid; Chloroplast. 0.0
Sma3: Elongation factor Ts 1.251e-35
Complete
sp_v3.0_unigene7219 SustainPine v3.0 1416
AutoFact: chloroplast polyprotein of elongation factor Ts precursor [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Elongation factor Ts 4.088e-07
Putative C-terminus
sp_v3.0_unigene9638 SustainPine v3.0 1676
AutoFact: Mitochondrial elongation factor G [Oryza sativa Japonica Group] gb|EAZ27513.1| hypothetical protein OsJ_11462 [Oryza sativa Japonica Group] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: mEF-G 4.14e-08
C-terminus
sp_v3.0_unigene13173 SustainPine v3.0 2428
AutoFact: Elongation factor 1-gamma n=1 Tax=Prunus avium RepID=EF1G_PRUAV 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Elongation factor 1-gamma 3.063e-12
Misassembled
sp_v3.0_unigene15186 SustainPine v3.0 931
AutoFact: 60s acidic ribosomal protein [Prunus dulcis] gb|ABH03379.1| 60S acidic ribosomal protein [Prunus dulcis] 2.0e-09
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative uncharacterized protein 0.0
Putative Complete
sp_v3.0_unigene15800 SustainPine v3.0 1991
AutoFact: Elongation factor Tu n=3 Tax=Spermatophyta RepID=A9NWL9_PICSI 0.0
FL-Next: sp=Elongation factor Tu; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Elongation factor Tu 0.0
Complete
sp_v3.0_unigene16347 SustainPine v3.0 516
AutoFact: Elongation factor 1-alpha n=178 Tax=Eukaryota RepID=EF1A_PIRIN 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Elongation factor 1-alpha 0.0
C-terminus
sp_v3.0_unigene16970 SustainPine v3.0 1052
AutoFact: Chain t, Localization Of The Large Subunit Ribosomal Proteins Into A 5.5 A Cryo-Em Map Of Triticum Aestivum Translating 80s Ribosome pdb|3IZ5|UU Chain u, Localization Of The Large Subunit Ribosomal Proteins Into A 5.5 A Cryo-Em Map Of Triticum Aestivum Tr 1.0e-17
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene17029 SustainPine v3.0 1558
AutoFact: Putative elongation factor n=1 Tax=Cryptomeria japonica RepID=Q1XG58_CRYJA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene17316 SustainPine v3.0 1346
AutoFact: Putative elongation factor n=1 Tax=Cryptomeria japonica RepID=Q1XG58_CRYJA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Elongation factor 1-delta 1 2.721e-14
Complete
sp_v3.0_unigene17459 SustainPine v3.0 1137
AutoFact: 60S acidic ribosomal protein P3-1 n=2 Tax=Arabidopsis RepID=RLA31_ARATH 6.0e-11
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene17976 SustainPine v3.0 1361
AutoFact: Elongation factor Tu n=3 Tax=Spermatophyta RepID=A9NWL9_PICSI 0.0
FL-Next: sp=Elongation factor Tu; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Elongation factor Tu 0.0
C-terminus
sp_v3.0_unigene18105 SustainPine v3.0 1486
AutoFact: RecName: Full=60S acidic ribosomal protein P0 gb|AAB63814.1| acidic ribosomal protein P0 [Glycine max] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 60S acidic ribosomal protein P0 8.661e-19
Complete
sp_v3.0_unigene18146 SustainPine v3.0 1050
AutoFact: elongation factor EF-P [Arabidopsis thaliana] gb|AAL36090.1| putative elongation factor P (EF-P) [Arabidopsis thaliana] gb|AAM51349.1| putative elongation factor P (EF-P) [Arabidopsis thaliana] gb|AAM64282.1| putative elongation factor P (EF-P) [Arabidops 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative uncharacterized protein 0.0
Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain