Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: translational elongation

Term: GO:0006414  Help

Source: GO from Sma3

Ontology: Biological Process

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene53835 SustainPine v3.0 340
• AutoFact: Putative elongation factor n=1 Tax=Cryptomeria japonica RepID=Q1XG58_CRYJA 1.0e-19
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene53922 SustainPine v3.0 124
• AutoFact: Elongation factor 1-alpha n=4 Tax=Chara RepID=F1T1F1_9VIRI 3.0e-06
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Elongation factor 1-alpha, putative 1.821e-07
Putative N-terminus
sp_v3.0_unigene53936 SustainPine v3.0 190
• AutoFact: elongation factor 1-alpha [Cucumis sativus] 3.0e-18
• FL-Next: sp=Elongation factor 1-alpha; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Elongation factor 1-alpha 1.104e-38
Internal
sp_v3.0_unigene53980 SustainPine v3.0 387
• AutoFact: translation elongation factor-1 alpha [Pseudotsuga menziesii var. menziesii] gb|AAV92326.1| translation elongation factor-1 alpha [Pseudotsuga menziesii var. menziesii] gb|AAV92327.1| translation elongation factor-1 alpha [Pseudotsuga menziesii var. menzi 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Elongation factor 1-alpha 0.0
Putative Complete
sp_v3.0_unigene54377 SustainPine v3.0 478
• AutoFact: Translation elongation factor-1 alpha (Fragment) n=15 Tax=Dothideomycetes RepID=D3YFQ9_9PLEO 0.0
• FL-Next: sp=Elongation factor 1-alpha; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Elongation factor 1-alpha 1.586e-39
Internal
sp_v3.0_unigene54453 SustainPine v3.0 342
• AutoFact: translation elongation factor-1 alpha [Picea abies] 7.0e-24
• FL-Next: sp=Elongation factor 1-alpha; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Elongation factor 1-alpha 1.891e-16
Putative C-terminus
sp_v3.0_unigene54953 SustainPine v3.0 318
• AutoFact: Elongation factor 1-alpha, putative (Fragment) n=1 Tax=Ricinus communis RepID=B9TK78_RICCO 6.02558e-44
• FL-Next: sp=Elongation factor 1-alpha; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Elongation factor 1-alpha 4.849e-39
Internal
sp_v3.0_unigene54957 SustainPine v3.0 235
• AutoFact: 60S acidic ribosomal protein P0 n=1 Tax=Caligus clemensi RepID=C1C0H6_9MAXI 2.0e-27
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S acidic ribosomal protein P0 1.862e-12
Internal
sp_v3.0_unigene55792 SustainPine v3.0 293
• AutoFact: Putative elongation factor 1-alpha (Fragment) n=1 Tax=Prunus dulcis RepID=A7Y7K1_PRUDU 8.0e-17
• FL-Next: sp=Elongation factor 1-alpha; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Elongation factor 1-alpha 0.0
N-terminus
sp_v3.0_unigene56224 SustainPine v3.0 197
• AutoFact: polyubiquitin [Pinus sylvestris] 1.0e-25
• FL-Next: tr=Polyubiquitin; Pinus sylvestris (Scots pine). 0.0
• Sma3: Ubiquitin 4.94e-07
Putative N-terminus
sp_v3.0_unigene57132 SustainPine v3.0 472
• AutoFact: translation elongation factor-1 alpha [Pseudotsuga menziesii var. menziesii] gb|AAV92326.1| translation elongation factor-1 alpha [Pseudotsuga menziesii var. menziesii] gb|AAV92327.1| translation elongation factor-1 alpha [Pseudotsuga menziesii var. menzi 4.00001e-41
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Elongation factor 1-alpha 3.315e-18
N-terminus
sp_v3.0_unigene57683 SustainPine v3.0 477
• AutoFact: Elongation factor 1-beta n=2 Tax=Sclerotiniaceae RepID=A7EN12_SCLS1 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Elongation factor 1-beta 9.384e-16
Internal
sp_v3.0_unigene59229 SustainPine v3.0 245
• AutoFact: Elongation factor 1-alpha n=2 Tax=Enoplia RepID=E5S5Z6_TRISP 6.0e-11
• FL-Next: sp=Elongation factor 1-alpha; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Elongation factor 1-alpha 3.929e-36
N-terminus
sp_v3.0_unigene59563 SustainPine v3.0 381
• AutoFact: Elongation factor 1-delta 1 n=4 Tax=Oryza sativa RepID=EF1D1_ORYSJ 7.0e-12
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene59722 SustainPine v3.0 153
• AutoFact: Elongation factor 1-alpha (Fragment) n=1 Tax=Rimicaris exoculata RepID=D7F1R6_RIMEX 6.0e-19
• FL-Next: sp=Elongation factor 1-alpha; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Elongation factor 1-alpha 7.337e-32
Internal
sp_v3.0_unigene59946 SustainPine v3.0 99
• AutoFact: EF-1 alpha [Gymnadenia conopsea] 2.0e-06
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Elongation factor 1-alpha 5.584e-08
Putative C-terminus
sp_v3.0_unigene59986 SustainPine v3.0 279
• AutoFact: Putative elongation factor n=1 Tax=Cryptomeria japonica RepID=Q1XG58_CRYJA 2.0e-13
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene60073 SustainPine v3.0 186
• AutoFact: Elongation factor 1-alpha, putative (Fragment) n=1 Tax=Ricinus communis RepID=B9TK78_RICCO 4.0e-13
• FL-Next: sp=Elongation factor 1-alpha; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Elongation factor 1-alpha 8.572e-29
Internal
sp_v3.0_unigene60214 SustainPine v3.0 298
• AutoFact: elongation factor Ts family protein [Arabidopsis thaliana] emb|CAB43920.1| putative protein [Arabidopsis thaliana] emb|CAB79664.1| putative protein [Arabidopsis thaliana] gb|AAL10483.1| AT4g29060/F19B15_90 [Arabidopsis thaliana] gb|AEE85580.1| elongation 3.0e-16
• FL-Next: sp=Elongation factor Ts, chloroplastic; Rhodomonas salina (Cryptomonas salina). Plastid; Chloroplast. 0.0
• Sma3: Elongation factor Ts 2.317e-17
Putative N-terminus
sp_v3.0_unigene60764 SustainPine v3.0 161
• AutoFact: Elongation factor 1-alpha n=1 Tax=Capsicum annuum RepID=Q9M516_CAPAN 4.0e-13
• FL-Next: sp=Elongation factor 1-alpha; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Elongation factor 1-alpha 1.224e-36
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain