Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: carbon utilization

Term: GO:0015976  Help

Source: GO from Sma3

Ontology: Biological Process

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene10334 SustainPine v3.0 3686
• AutoFact: Gypsy/Ty-3 retroelement polyprotein; 69905-74404 n=1 Tax=Arabidopsis thaliana RepID=Q9LHM4_ARATH 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Retrotransposon protein, putative, unclassified 5.759e-13
Complete
sp_v3.0_unigene11811 SustainPine v3.0 1356
• AutoFact: Polyprotein n=1 Tax=Glycine max RepID=Q84ZV5_SOYBN 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Retrotransposon protein, putative, Ty3-gypsy subclass 1.036e-27
Complete
sp_v3.0_unigene13228 SustainPine v3.0 1640
• AutoFact: Carbonic anhydrase n=1 Tax=Picea sitchensis RepID=A9P240_PICSI 0.0
• FL-Next: sp=Carbonic anhydrase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene15477 SustainPine v3.0 618
• AutoFact: Polyprotein (Fragment) n=1 Tax=Ananas comosus RepID=B4YF15_ANACO 3.0e-30
• FL-Next: sp=RNA-directed DNA polymerase homolog; berteroana). Mitochondrion. 0.0
• Sma3: Retrotransposon protein, putative, unclassified 1.637e-14
Putative Complete
sp_v3.0_unigene16957 SustainPine v3.0 1116
• AutoFact: Carbonic anhydrase n=2 Tax=Picea sitchensis RepID=A9NNY0_PICSI 0.0
• FL-Next: sp=Carbonic anhydrase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene16974 SustainPine v3.0 1244
• AutoFact: Carbonic anhydrase n=3 Tax=Picea sitchensis RepID=A9NSY6_PICSI 0.0
• FL-Next: sp=Carbonic anhydrase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene20715 SustainPine v3.0 749
• AutoFact: Retrotransposon protein, putative, unclassified n=2 Tax=Oryza sativa RepID=Q10RT1_ORYSJ 0.0
• FL-Next: sp=Uncharacterized mitochondrial protein AtMg00860; Arabidopsis thaliana (Mouse-ear cress). Mitochondrion. 0.0
• Sma3: Putative retroelement 5.471e-17
Complete
sp_v3.0_unigene24578 SustainPine v3.0 447
• AutoFact: RNA-directed DNA polymerase (Reverse transcriptase); Chromo; Zinc finger, CCHC-type; Peptidase aspartic, active site; Polynucleotidyl transferase, Ribonuclease H fold n=1 Tax=Medicago truncatula RepID=A2Q2C7_MEDTR 7.0e-40
• FL-Next: sp=Uncharacterized mitochondrial protein AtMg00860; Arabidopsis thaliana (Mouse-ear cress). Mitochondrion. 0.0
• Sma3: Retrotransposon protein, putative, unclassified 1.873e-17
C-terminus
sp_v3.0_unigene27595 SustainPine v3.0 910
• AutoFact: Polyprotein n=1 Tax=Glycine max RepID=Q84ZV5_SOYBN 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Retrotransposon protein, putative, Ty3-gypsy subclass 1.211e-19
Complete
sp_v3.0_unigene31724 SustainPine v3.0 565
• AutoFact: Carbonic anhydrase n=1 Tax=Picea sitchensis RepID=A9NX90_PICSI 3.0e-36
• FL-Next: sp=Carbonic anhydrase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene33807 SustainPine v3.0 2898
• AutoFact: RNA-directed DNA polymerase (Reverse transcriptase); Chromo; Zinc finger, CCHC-type; Peptidase aspartic, active site; Polynucleotidyl transferase, Ribonuclease H fold [Medicago truncatula] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Polyprotein 2.063e-24
Complete
sp_v3.0_unigene40608 SustainPine v3.0 1303
• AutoFact: PREDICTED: similar to polyprotein n=1 Tax=Vitis vinifera RepID=UPI0001983558 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Retrotransposon protein, putative, unclassified 1.93e-15
Putative Complete
sp_v3.0_unigene41003 SustainPine v3.0 2588
• AutoFact: Gypsy/Ty-3 retroelement polyprotein; 69905-74404 n=1 Tax=Arabidopsis thaliana RepID=Q9LHM4_ARATH 0.0
• FL-Next: tr=Gypsy/Ty-3 retroelement polyprotein; 69905-74404; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: Retrotransposon protein, putative, unclassified 6.424e-18
Putative C-terminus
sp_v3.0_unigene42494 SustainPine v3.0 766
• AutoFact: Polyprotein n=2 Tax=Primula vulgaris RepID=A5X2S4_9ERIC 0.0
• FL-Next: sp=Uncharacterized mitochondrial protein AtMg00860; Arabidopsis thaliana (Mouse-ear cress). Mitochondrion. 0.0
• Sma3: Polyprotein 1.477e-24
Putative Complete
sp_v3.0_unigene44329 SustainPine v3.0 525
• AutoFact: Gag-pol polyprotein n=1 Tax=Silene latifolia RepID=E7BQD5_SILLA 4.0e-29
• FL-Next: sp=RNA-directed DNA polymerase homolog; berteroana). Mitochondrion. 0.0
• Sma3: Retrotransposon protein, putative, Ty3-gypsy subclass 1.47e-11
Putative Complete
sp_v3.0_unigene44690 SustainPine v3.0 176
• AutoFact: Retrotransposon protein, putative, Ty3-gypsy subclass n=2 Tax=Poaceae RepID=Q2QUR6_ORYSJ 2.0e-19
• FL-Next: sp=RNA-directed DNA polymerase homolog; berteroana). Mitochondrion. 0.0
• Sma3: Reverse transcriptase 1.4e-30
Internal
sp_v3.0_unigene45798 SustainPine v3.0 267
• AutoFact: PREDICTED: similar to polyprotein n=1 Tax=Vitis vinifera RepID=UPI0001983558 4.0e-23
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
• Sma3: Retrotransposon protein, putative, Ty3-gypsy subclass 9.641e-31
Internal
sp_v3.0_unigene45930 SustainPine v3.0 1032
• AutoFact: Polyprotein (Fragment) n=1 Tax=Ananas comosus RepID=B4YF15_ANACO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Retrotransposon protein, putative, Ty3-gypsy subclass 7.156e-11
Putative Complete
sp_v3.0_unigene46733 SustainPine v3.0 600
• AutoFact: RVT_1 domain containing protein 3.0e-19
• FL-Next: sp=Uncharacterized mitochondrial protein AtMg00860; Arabidopsis thaliana (Mouse-ear cress). Mitochondrion. 0.0
• Sma3: Retrotransposon protein, putative, Ty3-gypsy subclass 0.0
N-terminus
sp_v3.0_unigene46855 SustainPine v3.0 688
• AutoFact: Pol protein integrase region (Fragment) n=6 Tax=Spermatophyta RepID=Q9M6N3_9CONI 0.0
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
• Sma3: Pol protein integrase region 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain