Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: carbon utilization

Term: GO:0015976  Help

Source: GO from Sma3

Ontology: Biological Process

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene63470 SustainPine v3.0 357
• AutoFact: Reverse transcriptase (Fragment) n=1 Tax=Pinus radiata RepID=Q56GF9_PINRA 9.0e-39
• FL-Next: sp=RNA-directed DNA polymerase homolog; berteroana). Mitochondrion. 0.0
• Sma3: Retrotransposon protein, putative, Ty3-gypsy subclass 4.379e-36
Putative C-terminus
sp_v3.0_unigene64059 SustainPine v3.0 142
• AutoFact: Reverse transcriptase (Fragment) n=1 Tax=Pinus radiata RepID=Q56GF9_PINRA 2.0e-18
• FL-Next: sp=RNA-directed DNA polymerase homolog; berteroana). Mitochondrion. 0.0
• Sma3: Gag-Pol polyprotein 2.041e-12
Internal
sp_v3.0_unigene64082 SustainPine v3.0 264
• AutoFact: Pol protein integrase region (Fragment) n=6 Tax=Spermatophyta RepID=Q9M6N3_9CONI 3.0e-38
• FL-Next: tr=RNA-directed DNA polymerase (Reverse transcriptase); Chromo; Zinc finger, CCHC-type; Peptidase aspartic, active site; Polynucleotidyl transferase, Ribonuclease H fold; Medicago truncatula (Barrel medic) (Medicago tribuloides). 0.0
• Sma3: Pol protein integrase region 0.0
Internal
sp_v3.0_unigene64850 SustainPine v3.0 132
• AutoFact: Reverse transcriptase (Fragment) n=2 Tax=Sciadopitys verticillata RepID=Q56GF7_SCIVE 1.0e-10
• FL-Next: sp=RNA-directed DNA polymerase homolog; berteroana). Mitochondrion. 0.0
• Sma3: Reverse transcriptase 8.872e-15
Internal
sp_v3.0_unigene66214 SustainPine v3.0 372
• AutoFact: Putative retroelement pol polyprotein n=1 Tax=Arabidopsis thaliana RepID=Q9SQW9_ARATH 6.0e-33
• FL-Next: sp=RNA-directed DNA polymerase homolog; berteroana). Mitochondrion. 0.0
• Sma3: Retrotransposon protein, putative, Ty3-gypsy subclass 4.091e-32
Putative C-terminus
sp_v3.0_unigene66304 SustainPine v3.0 418
• AutoFact: Pol protein integrase region (Fragment) n=6 Tax=Spermatophyta RepID=Q9M6N3_9CONI 3.0e-37
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
• Sma3: Pol protein integrase region 0.0
Internal
sp_v3.0_unigene66332 SustainPine v3.0 402
• AutoFact: OSJNBa0004L19.22 protein n=1 Tax=Oryza sativa RepID=Q5JPZ2_ORYSA 9.0e-23
• FL-Next: sp=RNA-directed DNA polymerase homolog; berteroana). Mitochondrion. 0.0
• Sma3: Reverse transcriptase 2.755e-15
C-terminus
sp_v3.0_unigene66611 SustainPine v3.0 402
• AutoFact: Polyprotein n=2 Tax=Primula vulgaris RepID=A5X2S4_9ERIC 9.0e-39
• FL-Next: sp=Uncharacterized mitochondrial protein AtMg00860; Arabidopsis thaliana (Mouse-ear cress). Mitochondrion. 0.0
• Sma3: Retrotransposon protein, putative, Ty3-gypsy subclass 1.134e-21
Putative C-terminus
sp_v3.0_unigene66939 SustainPine v3.0 151
• AutoFact: Reverse transcriptase (Fragment) n=1 Tax=Cycas revoluta RepID=Q56GG4_CYCRE 2.0e-16
• FL-Next: sp=RNA-directed DNA polymerase homolog; berteroana). Mitochondrion. 0.0
• Sma3: Reverse transcriptase 0.0
Internal
sp_v3.0_unigene69477 SustainPine v3.0 218
• AutoFact: Putative polyprotein n=1 Tax=Oryza sativa Japonica Group RepID=Q60ET2_ORYSJ 2.0e-18
• FL-Next: sp=RNA-directed DNA polymerase homolog; berteroana). Mitochondrion. 0.0
• Sma3: Gag-Pol polyprotein 5.658e-13
C-terminus
sp_v3.0_unigene69666 SustainPine v3.0 268
• AutoFact: Gag-pol polyprotein n=1 Tax=Silene latifolia RepID=E7BQD5_SILLA 2.0e-17
• FL-Next: sp=RNA-directed DNA polymerase homolog; berteroana). Mitochondrion. 0.0
• Sma3: Reverse transcriptase 1.12e-12
Putative C-terminus
sp_v3.0_unigene69986 SustainPine v3.0 405
• AutoFact: Carbonic anhydrase, chloroplastic n=2 Tax=Triticeae RepID=CAHC_HORVU 5.0e-09
• FL-Next: sp=Carbonic anhydrase, chloroplastic; Hordeum vulgare (Barley). 0.0
C-terminus
sp_v3.0_unigene70745 SustainPine v3.0 361
• AutoFact: Reverse transcriptase (Fragment) n=1 Tax=Ginkgo biloba RepID=O82684_GINBI 1.0e-34
• FL-Next: sp=RNA-directed DNA polymerase homolog; berteroana). Mitochondrion. 0.0
• Sma3: Reverse transcriptase 0.0
C-terminus
sp_v3.0_unigene70937 SustainPine v3.0 407
• AutoFact: Gag-pol polyprotein n=1 Tax=Silene latifolia RepID=E7BQD5_SILLA 1.0e-22
• FL-Next: sp=RNA-directed DNA polymerase homolog; berteroana). Mitochondrion. 0.0
• Sma3: Gag-Pol polyprotein 2.724e-12
C-terminus
sp_v3.0_unigene72225 SustainPine v3.0 344
• AutoFact: Retrotransposon protein, putative, unclassified n=2 Tax=Oryza sativa Japonica Group RepID=Q53P05_ORYSJ 1.0e-21
• FL-Next: sp=Uncharacterized mitochondrial protein AtMg00860; Arabidopsis thaliana (Mouse-ear cress). Mitochondrion. 0.0
• Sma3: Retrotransposon protein, putative, Ty3-gypsy subclass 8.085e-12
Putative N-terminus
sp_v3.0_unigene76164 SustainPine v3.0 297
• AutoFact: Carbonic anhydrase n=3 Tax=Picea sitchensis RepID=A9NSY6_PICSI 1.0e-38
• FL-Next: sp=Carbonic anhydrase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Carbonic anhydrase 0.0
Internal
sp_v3.0_unigene77719 SustainPine v3.0 343
• AutoFact: Reverse transcriptase (Fragment) n=1 Tax=Ginkgo biloba RepID=O82684_GINBI 1.0e-26
• FL-Next: sp=RNA-directed DNA polymerase homolog; berteroana). Mitochondrion. 0.0
• Sma3: Reverse transcriptase 1.103e-28
Putative C-terminus
sp_v3.0_unigene79574 SustainPine v3.0 203
• AutoFact: Reverse transcriptase (Fragment) n=1 Tax=Ginkgo biloba RepID=O82684_GINBI 4.0e-20
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Reverse transcriptase 0.0
Putative C-terminus
sp_v3.0_unigene96270 SustainPine v3.0 444
• AutoFact: Putative gag-pol polyprotein, identical n=2 Tax=Solanum demissum RepID=Q5NRP4_SOLDE 0.0
• FL-Next: sp=RNA-directed DNA polymerase homolog; berteroana). Mitochondrion. 0.0
• Sma3: Retrotransposon protein, putative, Ty3-gypsy subclass 1.005e-40
C-terminus
sp_v3.0_unigene97999 SustainPine v3.0 680
• AutoFact: PREDICTED: similar to polyprotein n=1 Tax=Vitis vinifera RepID=UPI0001983558 0.0
• FL-Next: sp=RNA-directed DNA polymerase homolog; berteroana). Mitochondrion. 0.0
• Sma3: Retrotransposon protein, putative, Ty3-gypsy subclass 1.639e-27
Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain