Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: carbon utilization

Term: GO:0015976  Help

Source: GO from Sma3

Ontology: Biological Process


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene56411 SustainPine v3.0 263
AutoFact: Reverse transcriptase (Fragment) n=1 Tax=Cycas revoluta RepID=Q56GG4_CYCRE 2.0e-20
FL-Next: sp=RNA-directed DNA polymerase homolog; berteroana). Mitochondrion. 0.0
Sma3: Retrotransposon protein, putative, unclassified 2.223e-23
Internal
sp_v3.0_unigene56506 SustainPine v3.0 516
AutoFact: Putative retroelement pol polyprotein n=1 Tax=Arabidopsis thaliana RepID=Q9SQW9_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Retrotransposon protein, putative, Ty3-gypsy subclass 2.365e-29
Putative Complete
sp_v3.0_unigene56835 SustainPine v3.0 297
AutoFact: PREDICTED: similar to polyprotein n=1 Tax=Vitis vinifera RepID=UPI0001983558 8.0e-25
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Sma3: Retrotransposon protein, putative, Ty3-gypsy subclass 9.142e-29
Internal
sp_v3.0_unigene56985 SustainPine v3.0 364
AutoFact: Retrotransposon protein, putative, unclassified n=2 Tax=Oryza sativa RepID=Q10RT1_ORYSJ 6.0e-35
FL-Next: sp=Uncharacterized mitochondrial protein AtMg00860; Arabidopsis thaliana (Mouse-ear cress). Mitochondrion. 0.0
Sma3: Polyprotein 6.344e-19
Putative N-terminus
sp_v3.0_unigene57503 SustainPine v3.0 356
AutoFact: gypsy/Ty-3 retroelement polyprotein; 69905-74404 [Arabidopsis thaliana] dbj|BAB03109.1| retroelement pol polyprotein [Arabidopsis thaliana] 9.0e-37
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Retrotransposon protein, putative, unclassified 4.256e-23
Putative Complete
sp_v3.0_unigene58346 SustainPine v3.0 310
AutoFact: Putative gag-pol polyprotein, identical [Solanum demissum] 8.0e-30
FL-Next: sp=RNA-directed DNA polymerase homolog; berteroana). Mitochondrion. 0.0
Sma3: Retrotransposon protein, putative, Ty3-gypsy subclass 4.75e-25
C-terminus
sp_v3.0_unigene58633 SustainPine v3.0 255
AutoFact: Pol protein integrase region (Fragment) n=1 Tax=Ginkgo biloba RepID=Q9ARL0_GINBI 8.0e-35
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Sma3: Pol protein integrase region 0.0
Internal
sp_v3.0_unigene58756 SustainPine v3.0 492
AutoFact: Polyprotein n=1 Tax=Glycine max RepID=Q84ZV5_SOYBN 2.0e-35
FL-Next: sp=Uncharacterized mitochondrial protein AtMg00860; Arabidopsis thaliana (Mouse-ear cress). Mitochondrion. 0.0
Sma3: Retrotransposon protein, putative, unclassified 7.135e-14
N-terminus
sp_v3.0_unigene59064 SustainPine v3.0 436
AutoFact: Reverse transcriptase (Fragment) n=1 Tax=Pinus radiata RepID=Q56GF9_PINRA 4.99983e-42
FL-Next: sp=RNA-directed DNA polymerase homolog; berteroana). Mitochondrion. 0.0
Sma3: Retrotransposon protein, putative, Ty3-gypsy subclass 0.0
Putative Complete
sp_v3.0_unigene59205 SustainPine v3.0 378
AutoFact: Pol protein integrase region (Fragment) n=6 Tax=Spermatophyta RepID=Q9M6N3_9CONI 2.99878e-43
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Sma3: Pol protein integrase region 0.0
Internal
sp_v3.0_unigene59470 SustainPine v3.0 335
AutoFact: Polyprotein n=2 Tax=Primula vulgaris RepID=A5X2S4_9ERIC 2.0e-27
FL-Next: sp=Uncharacterized mitochondrial protein AtMg00860; Arabidopsis thaliana (Mouse-ear cress). Mitochondrion. 0.0
Sma3: Retrotransposon protein, putative, unclassified 8.765e-14
Putative C-terminus
sp_v3.0_unigene59575 SustainPine v3.0 215
AutoFact: Retrotransposon protein, putative, unclassified n=1 Tax=Oryza sativa Japonica Group RepID=Q2QLN6_ORYSJ 4.0e-15
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Retrotransposon protein, putative, unclassified 5.652e-24
Putative Complete
sp_v3.0_unigene59603 SustainPine v3.0 316
AutoFact: Polyprotein n=2 Tax=Primula vulgaris RepID=A5X2S4_9ERIC 4.0e-39
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Retrotransposon protein, putative, Ty3-gypsy subclass 1.142e-25
Putative Complete
sp_v3.0_unigene60981 SustainPine v3.0 248
AutoFact: Reverse transcriptase (Fragment) n=3 Tax=Eleocharis cellulosa RepID=D5LVM7_9POAL 1.0e-28
FL-Next: sp=RNA-directed DNA polymerase homolog; berteroana). Mitochondrion. 0.0
Sma3: Reverse transcriptase 0.0
Internal
sp_v3.0_unigene61505 SustainPine v3.0 269
AutoFact: RNA-directed DNA polymerase (Reverse transcriptase) [Medicago truncatula] 2.0e-27
FL-Next: sp=RNA-directed DNA polymerase homolog; berteroana). Mitochondrion. 0.0
Sma3: Retrotransposon protein, putative, Ty3-gypsy subclass 5.843e-39
Putative C-terminus
sp_v3.0_unigene61816 SustainPine v3.0 349
AutoFact: Putative retroelement pol polyprotein n=1 Tax=Arabidopsis thaliana RepID=Q9SQW9_ARATH 2.0e-28
FL-Next: sp=Uncharacterized mitochondrial protein AtMg00860; Arabidopsis thaliana (Mouse-ear cress). Mitochondrion. 0.0
Sma3: Retrotransposon protein, putative, Ty3-gypsy subclass 3.805e-29
N-terminus
sp_v3.0_unigene62075 SustainPine v3.0 351
AutoFact: Polyprotein n=1 Tax=Glycine max RepID=Q84ZV5_SOYBN 8.0e-25
FL-Next: sp=Uncharacterized mitochondrial protein AtMg00860; Arabidopsis thaliana (Mouse-ear cress). Mitochondrion. 0.0
Sma3: Putative retroelement 2.896e-06
Putative N-terminus
sp_v3.0_unigene62243 SustainPine v3.0 379
AutoFact: RVT_1 domain containing protein 2.0e-08
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Retrotransposon protein, putative, Ty3-gypsy subclass 4.094e-39
Putative Complete
sp_v3.0_unigene62867 SustainPine v3.0 311
AutoFact: Retrotransposon protein, putative, Ty3-gypsy subclass n=2 Tax=Oryza sativa RepID=Q10GH3_ORYSJ 1.0e-13
FL-Next: tr=Gag-pol polyprotein; Solanum lycopersicum (Tomato) (Lycopersicon esculentum). 0.0
Sma3: Retrotransposon protein, putative, Ty3-gypsy subclass 0.0
Internal
sp_v3.0_unigene62940 SustainPine v3.0 177
AutoFact: Reverse transcriptase (Fragment) n=1 Tax=Taxus baccata RepID=Q56GF5_TAXBA 8.0e-19
FL-Next: sp=RNA-directed DNA polymerase homolog; berteroana). Mitochondrion. 0.0
Sma3: Reverse transcriptase 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain