Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: tricarboxylic acid cycle

Term: GO:0006099  Help

Source: GO from Sma3

Ontology: Biological Process


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene156649 SustainPine v3.0 364
AutoFact: Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial n=2 Tax=Dictyostelium RepID=DHSA_DICDI 2.0e-21
FL-Next: sp=Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial; Oryza sativa subsp. japonica (Rice). 0.0
Sma3: FP 1.905e-08
Internal
sp_v3.0_unigene156664 SustainPine v3.0 194
AutoFact: Probable succinyl-CoA ligase [ADP-forming] subunit alpha, mitochondrial n=8 Tax=Poaceae RepID=SUCA_ORYSJ 3.0e-19
FL-Next: sp=Probable succinyl-CoA ligase [ADP-forming] subunit alpha, mitochondrial; Oryza sativa subsp. japonica (Rice). 0.0
C-terminus
sp_v3.0_unigene156761 SustainPine v3.0 122
AutoFact: Isocitrate dehydrogenase [NADP] n=1 Tax=alpha proteobacterium HIMB114 RepID=D0RPJ4_9RICK 9.0e-15
FL-Next: sp=Isocitrate dehydrogenase [NADP]; Pinus pinaster (Maritime pine). 0.0
Sma3: Isocitrate dehydrogenase 1.232e-10
Internal
sp_v3.0_unigene156896 SustainPine v3.0 352
AutoFact: Malate dehydrogenase n=1 Tax=Dictyostelium purpureum RepID=F0Z8T4_DICPU 6.99949e-42
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Malate dehydrogenase 3.83e-38
Internal
sp_v3.0_unigene156972 SustainPine v3.0 186
AutoFact: Malate dehydrogenase n=10 Tax=Pinaceae RepID=A9NVT9_PICSI 7.0e-05
FL-Next: sp=Malate dehydrogenase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Malate dehydrogenase 1.137e-37
Internal
sp_v3.0_unigene157126 SustainPine v3.0 467
AutoFact: Aconitate hydratase 2 n=44 Tax=Enterobacteriaceae RepID=A7FM38_YERP3 0.0
FL-Next: tr=Predicted protein; Micromonas sp. (strain RCC299 / NOUM17) (Picoplanktonic green alga). 0.0
Internal
sp_v3.0_unigene157234 SustainPine v3.0 236
AutoFact: Isocitrate dehydrogenase [NADP] n=1 Tax=Homo sapiens RepID=Q13584_HUMAN 1.0e-33
FL-Next: sp=Isocitrate dehydrogenase [NADP]; Pinus pinaster (Maritime pine). 0.0
Sma3: Isocitrate dehydrogenase 1.232e-10
Internal
sp_v3.0_unigene157243 SustainPine v3.0 171
AutoFact: Succinate dehydrogenase flavoprotein subunit, putative n=3 Tax=Filobasidiella/Cryptococcus neoformans species complex RepID=E6RB91_CRYGW 2.0e-14
FL-Next: sp=Succinate dehydrogenase [ubiquinone] flavoprotein subunit 1, mitochondrial; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: FP 1.042e-12
Internal
sp_v3.0_unigene157621 SustainPine v3.0 379
AutoFact: Malate dehydrogenase n=1 Tax=Paramecium tetraurelia RepID=A0BHM8_PARTE 2.0e-24
FL-Next: sp=Malate dehydrogenase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Malate dehydrogenase 4.411e-33
C-terminus
sp_v3.0_unigene157714 SustainPine v3.0 322
AutoFact: Succinyl-CoA ligase [ADP-forming] subunit alpha-2, mitochondrial n=2 Tax=Solanum lycopersicum RepID=SUCA2_SOLLC 3.0e-15
FL-Next: sp=Succinyl-CoA ligase [ADP-forming] subunit alpha-2, mitochondrial; Solanum lycopersicum (Tomato) (Lycopersicon esculentum). 0.0
C-terminus
sp_v3.0_unigene157841 SustainPine v3.0 501
AutoFact: Isocitrate dehydrogenase [NADP] n=1 Tax=Capsaspora owczarzaki ATCC 30864 RepID=E9CAB2_9EUKA 0.0
FL-Next: sp=Isocitrate dehydrogenase [NADP]; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Isocitrate dehydrogenase 3.266e-15
Internal
sp_v3.0_unigene157948 SustainPine v3.0 523
AutoFact: Succinate-CoA ligase n=1 Tax=Capsaspora owczarzaki ATCC 30864 RepID=E9C8K7_9EUKA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Succinyl-CoA-ligase alpha subunit 9.528e-11
Internal
sp_v3.0_unigene158064 SustainPine v3.0 250
AutoFact: Citrate synthase (Fragment) n=1 Tax=Brissopsis lyrifera RepID=B6VQ00_9ECHN 4.0e-34
FL-Next: sp=Citrate synthase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Citrate synthase 0.0
Internal
sp_v3.0_unigene158519 SustainPine v3.0 198
AutoFact: Aconitase 2 n=1 Tax=Capsaspora owczarzaki ATCC 30864 RepID=E9C8Q7_9EUKA 2.0e-22
FL-Next: sp=Aconitate hydratase, mitochondrial; Gracilaria gracilis (Red alga). 0.0
Internal
sp_v3.0_unigene158943 SustainPine v3.0 263
AutoFact: Succinyl-CoA ligase n=2 Tax=Chlamydomonadales RepID=A8IWJ8_CHLRE 8.0e-27
FL-Next: sp=Probable succinyl-CoA ligase [ADP-forming] subunit alpha, mitochondrial; Oryza sativa subsp. japonica (Rice). 0.0
Internal
sp_v3.0_unigene160876 SustainPine v3.0 266
AutoFact: lethal (1) G0255, isoform B [Drosophila melanogaster] gb|AAN09177.1| lethal (1) G0255, isoform B [Drosophila melanogaster] gb|ACU51768.1| LP02262p [Drosophila melanogaster] 4.0e-08
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene165812 SustainPine v3.0 427
AutoFact: Aconitate hydratase, mitochondrial n=1 Tax=Pyrenophora tritici-repentis Pt-1C-BFP RepID=B2VXW9_PYRTR 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Isocitrate dehydrogenase/citrate hydrolyase 5.819e-10
Putative C-terminus
sp_v3.0_unigene182904 SustainPine v3.0 1038
AutoFact: NAD+ dependent isocitrate dehydrogenase subunit 1 [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: NAD-dependent isocitrate dehydrogenase 8.333e-12
C-terminus
sp_v3.0_unigene184629 SustainPine v3.0 552
AutoFact: Isocitrate lyase n=1 Tax=Pinus taeda RepID=Q41084_PINTA 0.0
FL-Next: sp=Isocitrate lyase; Pinus taeda (Loblolly pine). 0.0
Sma3: Isocitrate lyase 1.4013e-45
C-terminus
sp_v3.0_unigene186088 SustainPine v3.0 565
AutoFact: aconitate hydratase [Alteromonadales bacterium TW-7] gb|EAW29488.1| aconitate hydratase [Alteromonadales bacterium TW-7] 1.4013e-45
FL-Next: sp=3-isopropylmalate dehydratase; Arabidopsis thaliana (Mouse-ear cress). 0.0
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain