Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: tricarboxylic acid cycle

Term: GO:0006099  Help

Source: GO from Sma3

Ontology: Biological Process


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene127504 SustainPine v3.0 1204
AutoFact: phosphoenolpyruvate carboxylase [Ricinus communis] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative phosphoenolpyruvate carboxylase 2.29505e-41
Internal
sp_v3.0_unigene127561 SustainPine v3.0 835
AutoFact: RecName: Full=Putative aconitate hydratase, cytoplasmic; Short=Aconitase; AltName: Full=Citrate hydro-lyase dbj|BAD05751.1| putative Aconitate hydratase [Oryza sativa Japonica Group] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Aconitase 1.448e-13
N-terminus
sp_v3.0_unigene127597 SustainPine v3.0 1254
AutoFact: Malate dehydrogenase n=10 Tax=Pinaceae RepID=A9NVT9_PICSI 0.0
FL-Next: sp=Malate dehydrogenase; Pinus pinaster (Maritime pine). 0.0
Sma3: Malate dehydrogenase 3.08286e-44
C-terminus
sp_v3.0_unigene128103 SustainPine v3.0 838
AutoFact: Citrate synthase n=1 Tax=Picea sitchensis RepID=B8LLL1_PICSI 0.0
FL-Next: sp=Citrate synthase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Citrate synthase 0.0
N-terminus
sp_v3.0_unigene128321 SustainPine v3.0 371
AutoFact: Isocitrate dehydrogenase [NADP] n=4 Tax=Pinaceae RepID=B8LKH5_PICSI 3.0e-24
FL-Next: sp=Isocitrate dehydrogenase [NADP]; Pinus pinaster (Maritime pine). 0.0
Sma3: NADP-dependent isocitrate dehydrogenase 6.211e-18
N-terminus
sp_v3.0_unigene128686 SustainPine v3.0 858
AutoFact: Phosphoenolpyruvate carboxylase n=11 Tax=Spermatophyta RepID=CAPP_PICAB 0.0
FL-Next: tr=Phosphoenolpyruvate carboxylase; Picea abies (Norway spruce) (Picea excelsa). 0.0
Sma3: Phosphoenolpyruvate carboxylase 0.0
Internal
sp_v3.0_unigene135193 SustainPine v3.0 238
AutoFact: fumarase [Solanum tuberosum] 9.0e-10
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene135641 SustainPine v3.0 472
AutoFact: Citrate synthase (Fragment) n=1 Tax=Moniliophthora perniciosa FA553 RepID=E2M035_MONPE 0.0
FL-Next: sp=Citrate synthase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Citrate synthase 3.939e-32
Internal
sp_v3.0_unigene137575 SustainPine v3.0 235
AutoFact: RecName: Full=Probable succinyl-CoA ligase [ADP-forming] subunit alpha, mitochondrial; AltName: Full=Succinyl-CoA synthetase subunit alpha; Short=SCS-alpha; Flags: Precursor dbj|BAC83073.1| putative succinyl-CoA ligase alpha subunit [Oryza sativa Japonica 5.0e-17
FL-Next: sp=Probable succinyl-CoA ligase [ADP-forming] subunit alpha, mitochondrial; Oryza sativa subsp. japonica (Rice). 0.0
C-terminus
sp_v3.0_unigene137664 SustainPine v3.0 169
AutoFact: Malate dehydrogenase n=1 Tax=Pinus pinaster RepID=F4MKL8_PINPS 1.0e-11
FL-Next: sp=Malate dehydrogenase; Pinus pinaster (Maritime pine). 0.0
Sma3: Malate dehydrogenase 5.60519e-45
Internal
sp_v3.0_unigene140662 SustainPine v3.0 610
AutoFact: Malate dehydrogenase n=10 Tax=Pinaceae RepID=A9NVT9_PICSI 0.0
FL-Next: sp=Malate dehydrogenase; Pinus pinaster (Maritime pine). 0.0
Sma3: Malate dehydrogenase 1.54143e-44
Misassembled
sp_v3.0_unigene140795 SustainPine v3.0 374
AutoFact: Isocitrate dehydrogenase [NADP] n=4 Tax=Pinaceae RepID=B8LKH5_PICSI 5.0e-24
FL-Next: sp=Isocitrate dehydrogenase [NADP]; Pinus pinaster (Maritime pine). 0.0
Sma3: NADP-dependent isocitrate dehydrogenase 6.386e-15
C-terminus
sp_v3.0_unigene141928 SustainPine v3.0 453
AutoFact: Malate dehydrogenase (Fragment) n=1 Tax=Capsicum chinense RepID=Q4LAW9_CAPCH 2.8026e-45
FL-Next: sp=Malate dehydrogenase; Pinus pinaster (Maritime pine). 0.0
Sma3: Malate dehydrogenase 0.0
C-terminus
sp_v3.0_unigene142377 SustainPine v3.0 1091
AutoFact: Aconitate hydratase (Fragment) n=8 Tax=Pinaceae RepID=E3V1P1_PINSY 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative aconitase 2.571e-14
Internal
sp_v3.0_unigene142563 SustainPine v3.0 265
AutoFact: Isocitrate dehydrogenase [NADP] n=1 Tax=Prunus persica RepID=Q946X9_PRUPE 2.0e-17
FL-Next: sp=Isocitrate dehydrogenase [NADP]; Pinus pinaster (Maritime pine). 0.0
Sma3: Putative isocitrate dehydrogenase 3.097e-08
Internal
sp_v3.0_unigene143814 SustainPine v3.0 773
AutoFact: Aconitate hydratase (Fragment) n=8 Tax=Pinaceae RepID=E3V1P1_PINSY 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative aconitase 2.552e-14
Misassembled
sp_v3.0_unigene144206 SustainPine v3.0 491
AutoFact: Malate synthase n=3 Tax=Picea sitchensis RepID=A9NW51_PICSI 2.0e-32
FL-Next: sp=Malate synthase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Malate synthase, glyoxysomal 9.404e-28
C-terminus
sp_v3.0_unigene144329 SustainPine v3.0 287
AutoFact: Aconitate hydratase (Fragment) n=8 Tax=Pinaceae RepID=E3V1P1_PINSY 4.0e-37
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Aconitase 1.309e-13
Internal
sp_v3.0_unigene145896 SustainPine v3.0 430
AutoFact: mitochondrial ribosomal protein S14 [Oryza sativa Japonica Group] dbj|BAA82751.1| mitochondrial ribosomal portein S14 [Oryza sativa Japonica Group] dbj|BAD09056.1| mitochondrial ribosomal protein S14 [Oryza sativa Japonica Group] dbj|BAG95632.1| unnamed p 2.0e-06
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative C-terminus
sp_v3.0_unigene146251 SustainPine v3.0 293
AutoFact: Malate dehydrogenase n=1 Tax=Pinus pinaster RepID=F4MKL8_PINPS 5.0e-32
FL-Next: sp=Malate dehydrogenase; Pinus pinaster (Maritime pine). 0.0
Sma3: Malate dehydrogenase 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain