Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: tricarboxylic acid cycle

Term: GO:0006099  Help

Source: GO from Sma3

Ontology: Biological Process

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene75509 SustainPine v3.0 179
• AutoFact: Succinate dehydrogenase [ubiquinone] flavoprotein subunit 2, mitochondrial n=2 Tax=Arabidopsis RepID=DHSA2_ARATH 1.0e-09
• FL-Next: sp=Succinate dehydrogenase [ubiquinone] flavoprotein subunit 2, mitochondrial; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: FP 8.582e-13
Internal
sp_v3.0_unigene75838 SustainPine v3.0 325
• AutoFact: Malate dehydrogenase n=1 Tax=Ostreococcus lucimarinus CCE9901 RepID=A4RTP0_OSTLU 1.0e-24
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Malate dehydrogenase 0.0
Putative C-terminus
sp_v3.0_unigene76010 SustainPine v3.0 401
• AutoFact: Malate dehydrogenase n=1 Tax=Laccaria bicolor S238N-H82 RepID=B0D7C1_LACBS 0.0
• FL-Next: sp=Malate dehydrogenase; Sequoia sempervirens (California redwood) (Taxodium sempervirens). 0.0
• Sma3: Malate dehydrogenase 0.0
Internal
sp_v3.0_unigene76648 SustainPine v3.0 356
• AutoFact: Succinate dehydrogenase flavoprotein subunit, putative n=3 Tax=Filobasidiella/Cryptococcus neoformans species complex RepID=E6RB91_CRYGW 4.0e-24
• FL-Next: sp=Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial; Oryza sativa subsp. japonica (Rice). 0.0
C-terminus
sp_v3.0_unigene77374 SustainPine v3.0 393
• AutoFact: Citrate synthase n=1 Tax=Schizophyllum commune H4-8 RepID=D8Q525_SCHCM 1.0e-37
• FL-Next: sp=Citrate synthase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Citrate synthase 0.0
C-terminus
sp_v3.0_unigene77401 SustainPine v3.0 236
• AutoFact: Malate dehydrogenase n=10 Tax=Pinaceae RepID=A9NVT9_PICSI 5.0e-13
• FL-Next: sp=Malate dehydrogenase; Pinus pinaster (Maritime pine). 0.0
• Sma3: Malate dehydrogenase 2.135e-38
Misassembled
sp_v3.0_unigene79738 SustainPine v3.0 352
• AutoFact: HSP70 family protein n=1 Tax=Naegleria gruberi RepID=D2V432_NAEGR 8.0e-40
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Heat shock protein 70 0.0
Internal
sp_v3.0_unigene79790 SustainPine v3.0 326
• AutoFact: Citrate synthase n=1 Tax=Magnaporthe oryzae 70-15 RepID=Q2KGJ7_MAGO7 0.0
• FL-Next: sp=Citrate synthase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Citrate synthase 5.57857e-42
Internal
sp_v3.0_unigene80408 SustainPine v3.0 250
• AutoFact: Isocitrate dehydrogenase [NAD] regulatory subunit 3 [Arabidopsis thaliana] sp|O81796.1|IDH3_ARATH RecName: Full=Isocitrate dehydrogenase [NAD] regulatory subunit 3, mitochondrial; AltName: Full=IDH-III; AltName: Full=Isocitric dehydrogenase 3; AltName: Fu 3.0e-19
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: NAD-dependent isocitrate dehydrogenase 9.54e-13
C-terminus
sp_v3.0_unigene80417 SustainPine v3.0 347
• AutoFact: Succinyl-CoA synthetase alpha subunit, putative n=3 Tax=Trichocomaceae RepID=B6QGB0_PENMQ 1.99993e-41
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene80422 SustainPine v3.0 394
• AutoFact: Iron-sulphar subunit protein of succinate dehydrogenase n=2 Tax=Lentinula edodes RepID=Q76KC3_LENED 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Iron-sulfur subunit of complex II 1.326e-17
Internal
sp_v3.0_unigene80953 SustainPine v3.0 110
• AutoFact: Malate synthase n=2 Tax=Ustilaginaceae RepID=E7A2G4_9BASI 3.0e-11
• FL-Next: sp=Malate synthase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Malate synthase 3.957e-18
Internal
sp_v3.0_unigene81418 SustainPine v3.0 170
• AutoFact: Malate dehydrogenase n=2 Tax=Chlamydomonas reinhardtii RepID=A8J0W9_CHLRE 1.0e-08
• FL-Next: sp=Malate dehydrogenase; Pinus pinaster (Maritime pine). 0.0
• Sma3: Malate dehydrogenase 4.55999e-40
Internal
sp_v3.0_unigene100689 SustainPine v3.0 301
• AutoFact: Isocitrate dehydrogenase [NAD] regulatory subunit 1, mitochondrial n=4 Tax=Brassicaceae RepID=IDH1_ARATH 7.0e-23
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: NAD-dependent isocitrate dehydrogenase 1.249e-12
Internal
sp_v3.0_unigene110758 SustainPine v3.0 422
• AutoFact: Isocitrate lyase n=1 Tax=Pinus taeda RepID=ACEA_PINTA 0.0
• FL-Next: sp=Isocitrate lyase; Pinus taeda (Loblolly pine). 0.0
• Sma3: Isocitrate lyase 2.8026e-45
Internal
sp_v3.0_unigene114880 SustainPine v3.0 238
• AutoFact: Isocitrate lyase n=1 Tax=Pinus taeda RepID=Q41084_PINTA 9.0e-31
• FL-Next: sp=Isocitrate lyase; Pinus taeda (Loblolly pine). 0.0
• Sma3: Isocitrate lyase 1.09e-21
Internal
sp_v3.0_unigene116568 SustainPine v3.0 467
• AutoFact: Aconitate hydratase n=2 Tax=Laccaria bicolor S238N-H82 RepID=B0D3C8_LACBS 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Isocitrate dehydrogenase/citrate hydrolyase 5.819e-10
Internal
sp_v3.0_unigene119921 SustainPine v3.0 301
• AutoFact: Aconitase n=1 Tax=Coprinopsis cinerea okayama7#130 RepID=A8NMJ8_COPC7 2.94273e-44
• FL-Next: sp=Aconitate hydratase, mitochondrial; Gracilaria gracilis (Red alga). 0.0
• Sma3: Isocitrate dehydrogenase/citrate hydrolyase 5.819e-10
Internal
sp_v3.0_unigene126511 SustainPine v3.0 703
• AutoFact: Isocitrate lyase n=1 Tax=Pinus taeda RepID=Q41084_PINTA 0.0
• FL-Next: sp=Isocitrate lyase; Pinus taeda (Loblolly pine). 0.0
• Sma3: Isocitrate lyase 2.8026e-45
C-terminus
sp_v3.0_unigene126830 SustainPine v3.0 808
• AutoFact: Putative ribosomal-protein S6 kinase-like protein n=1 Tax=Solanum lycopersicum RepID=Q56R02_SOLLC 9.99967e-42
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Malate dehydrogenase 8.91506e-42
Putative Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain