Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Polyubiquitin

Source: Description from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene5151 SustainPine v3.0 851
AutoFact: Polyubiquitin 4 UBQ4 n=1 Tax=Arabidopsis thaliana RepID=Q0WRN6_ARATH 1.0e-20
FL-Next: tr=Polyubiquitin; Pinus sylvestris (Scots pine). 0.0
Sma3: Polyubiquitin 2.115e-06
Putative N-terminus
sp_v3.0_unigene12114 SustainPine v3.0 1654
AutoFact: polyubiquitin 4 [Arabidopsis thaliana] ref|XP_002881273.1| hypothetical protein ARALYDRAFT_482268 [Arabidopsis lyrata subsp. lyrata] sp|P0CH32.1|UBQ4_ARATH RecName: Full=Polyubiquitin 4; Contains: RecName: Full=Ubiquitin; Flags: Precursor emb|CAA31331.1| 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Polyubiquitin 0.0
Putative Complete
sp_v3.0_unigene13749 SustainPine v3.0 2389
AutoFact: Polyubiquitin 14 n=9 Tax=core eudicotyledons RepID=UBQ14_ARATH 0.0
FL-Next: tr=Putative polyubiquitin; Picea abies (Norway spruce) (Picea excelsa). 0.0
Sma3: Polyubiquitin 0.0
Putative Complete
sp_v3.0_unigene16586 SustainPine v3.0 2316
AutoFact: ubiquitin [Antirrhinum majus] 0.0
FL-Next: tr=Putative polyubiquitin; Picea abies (Norway spruce) (Picea excelsa). 0.0
Sma3: Polyubiquitin 0.0
Complete
sp_v3.0_unigene17347 SustainPine v3.0 1746
AutoFact: ubiquitin [Antirrhinum majus] 0.0
FL-Next: tr=Putative polyubiquitin; Picea abies (Norway spruce) (Picea excelsa). 0.0
Sma3: Polyubiquitin 0.0
Complete
sp_v3.0_unigene18014 SustainPine v3.0 2156
AutoFact: polyubiquitin [Zea mays] gb|AAB21994.1| polyubiquitin [Zea mays] gb|AAQ07454.1| ubiquitin [Musa acuminata] dbj|BAD45891.1| polyubiquitin [Oryza sativa Japonica Group] gb|EEC81187.1| hypothetical protein OsI_24193 [Oryza sativa Indica Group] gb|EEE66229.1| 0.0
FL-Next: sp=Polyubiquitin; Petroselinum crispum (Parsley) (Petroselinum hortense). 0.0
Sma3: Polyubiquitin 0.0
Complete
sp_v3.0_unigene21735 SustainPine v3.0 1431
AutoFact: polyubiquitin 4 [Arabidopsis thaliana] ref|XP_002881273.1| hypothetical protein ARALYDRAFT_482268 [Arabidopsis lyrata subsp. lyrata] sp|P0CH32.1|UBQ4_ARATH RecName: Full=Polyubiquitin 4; Contains: RecName: Full=Ubiquitin; Flags: Precursor emb|CAA31331.1| 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Polyubiquitin 0.0
Complete
sp_v3.0_unigene21736 SustainPine v3.0 393
AutoFact: Polyubiquitin 4 UBQ4 n=1 Tax=Arabidopsis thaliana RepID=Q0WRN6_ARATH 0.0
FL-Next: tr=Polyubiquitin; Pinus sylvestris (Scots pine). 0.0
Sma3: Polyubiquitin 9.247e-08
Putative C-terminus
sp_v3.0_unigene21740 SustainPine v3.0 1197
AutoFact: Polyubiquitin 14 n=9 Tax=core eudicotyledons RepID=UBQ14_ARATH 0.0
FL-Next: sp=Polyubiquitin 14; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Polyubiquitin 0.0
Complete
sp_v3.0_unigene29394 SustainPine v3.0 1584
AutoFact: ubiquitin precursor [Hevea brasiliensis] 9.0e-17
FL-Next: tr=Putative polyubiquitin; Picea abies (Norway spruce) (Picea excelsa). 0.0
Sma3: Polyubiquitin 9.035e-07
Complete
sp_v3.0_unigene32678 SustainPine v3.0 522
AutoFact: polyubiquitin 4 UBQ4 [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative polyubiquitin; Picea abies (Norway spruce) (Picea excelsa). 0.0
Sma3: Polyubiquitin 1.014e-07
Putative Complete
sp_v3.0_unigene32918 SustainPine v3.0 951
AutoFact: Ubiquitin n=1 Tax=Aureococcus anophagefferens RepID=F0XWQ8_9STRA 0.0
FL-Next: tr=Putative polyubiquitin; Picea abies (Norway spruce) (Picea excelsa). 0.0
Sma3: Polyubiquitin 1.014e-07
Putative Complete
sp_v3.0_unigene34399 SustainPine v3.0 539
AutoFact: Polyubiquitin (ISS) n=1 Tax=Ostreococcus tauri RepID=Q00Y36_OSTTA 0.0
FL-Next: tr=Putative polyubiquitin; Picea abies (Norway spruce) (Picea excelsa). 0.0
Sma3: Polyubiquitin 2.102e-10
Putative Complete
sp_v3.0_unigene34780 SustainPine v3.0 1200
AutoFact: Polyubiquitin 14 n=9 Tax=core eudicotyledons RepID=UBQ14_ARATH 0.0
FL-Next: sp=Polyubiquitin 14; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Polyubiquitin 0.0
Complete
sp_v3.0_unigene34852 SustainPine v3.0 1217
AutoFact: Polyubiquitin 14 n=9 Tax=core eudicotyledons RepID=UBQ14_ARATH 0.0
FL-Next: sp=Polyubiquitin 14; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Polyubiquitin 0.0
Complete
sp_v3.0_unigene41892 SustainPine v3.0 198
AutoFact: polyubiquitin [Pinus sylvestris] 8.0e-14
FL-Next: tr=Polyubiquitin; Pinus sylvestris (Scots pine). 0.0
Sma3: Polyubiquitin 1.443e-07
Internal
sp_v3.0_unigene52255 SustainPine v3.0 375
AutoFact: polyubiquitin [Triticum aestivum] 2.99878e-43
FL-Next: tr=Putative polyubiquitin; Picea abies (Norway spruce) (Picea excelsa). 0.0
Sma3: Polyubiquitin 9.465e-08
Putative Complete
sp_v3.0_unigene52954 SustainPine v3.0 437
AutoFact: polyubiquitin [Triticum aestivum] 0.0
FL-Next: tr=Putative polyubiquitin; Picea abies (Norway spruce) (Picea excelsa). 0.0
Sma3: Polyubiquitin 9.912e-08
Putative Complete
sp_v3.0_unigene53829 SustainPine v3.0 449
AutoFact: Polyubiquitin 4 UBQ4 n=1 Tax=Arabidopsis thaliana RepID=Q0WRN6_ARATH 0.0
FL-Next: tr=Putative polyubiquitin; Picea abies (Norway spruce) (Picea excelsa). 0.0
Sma3: Polyubiquitin 9.465e-08
Putative Complete
sp_v3.0_unigene54348 SustainPine v3.0 225
AutoFact: Polyubiquitin 4 UBQ4 n=1 Tax=Arabidopsis thaliana RepID=Q0WRN6_ARATH 2.0e-18
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Polyubiquitin 8.308e-08
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain