Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Serine hydroxymethyltransferase

Term: IPR001085  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene225 SustainPine v3.0 2398
AutoFact: Serine hydroxymethyltransferase n=1 Tax=Picea sitchensis RepID=D5A8K3_PICSI 0.0
FL-Next: sp=Serine hydroxymethyltransferase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene439 SustainPine v3.0 2213
AutoFact: Serine hydroxymethyltransferase n=2 Tax=Picea sitchensis RepID=A9NUX0_PICSI 0.0
FL-Next: sp=Serine hydroxymethyltransferase; Pinus pinaster (Maritime pine). 0.0
Complete
sp_v3.0_unigene3362 SustainPine v3.0 2580
AutoFact: putative phosphatidylinositol 3,5-kinase [Oryza sativa Japonica Group] gb|ABF96451.1| phosphatidylinositol-4-phosphate 5-kinase family protein, putative, expressed [Oryza sativa Japonica Group] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Fyve finger-containing phosphoinositide kinase, fyv1, putative 9.203e-12
Complete
sp_v3.0_unigene4166 SustainPine v3.0 2860
AutoFact: TGA-type basic leucine zipper protein TGA2.2 [Phaseolus vulgaris] 0.0
FL-Next: sp=Transcription factor HBP-1b(c38); Triticum aestivum (Wheat). 0.0
Sma3: BZIP transcription factor 5.361e-19
Complete
sp_v3.0_unigene4227 SustainPine v3.0 2357
AutoFact: octopine synthase binding factor3 [Zea mays] emb|CAA48904.1| ocs-element binding factor 3.2 [Zea mays] 0.0
FL-Next: sp=Transcription factor HBP-1b(c38); Triticum aestivum (Wheat). 0.0
Sma3: BZIP transcription factor 5.361e-19
Complete
sp_v3.0_unigene4771 SustainPine v3.0 555
AutoFact: Serine hydroxymethyltransferase n=4 Tax=Arabidopsis RepID=Q8GRI1_ARATH 6.0e-08
FL-Next: sp=Serine hydroxymethyltransferase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Serine hydroxymethyltransferase 0.0
Putative C-terminus
sp_v3.0_unigene6005 SustainPine v3.0 2576
AutoFact: Serine hydroxymethyltransferase n=1 Tax=Ricinus communis RepID=B9RJC7_RICCO 0.0
FL-Next: sp=Serine hydroxymethyltransferase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative Complete
sp_v3.0_unigene8224 SustainPine v3.0 2003
AutoFact: TGA-type basic leucine zipper protein TGA2.1 [Phaseolus vulgaris] 0.0
FL-Next: sp=Transcription factor TGA5; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: BZIP transcription factor 4.754e-19
Complete
sp_v3.0_unigene9093 SustainPine v3.0 2563
AutoFact: glutamate synthase 1 [NADH] [Arabidopsis thaliana] ref|NP_001190529.1| glutamate synthase 1 [NADH] [Arabidopsis thaliana] ref|NP_001190530.1| glutamate synthase 1 [NADH] [Arabidopsis thaliana] sp|Q9LV03.2|GLUT1_ARATH RecName: Full=Glutamate synthase 1 [NA 0.0
FL-Next: sp=Glutamate synthase 1 [NADH], chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: NADH glutamate synthase 6.97e-11
N-terminus
sp_v3.0_unigene9798 SustainPine v3.0 2421
AutoFact: Fyve finger-containing phosphoinositide kinase, fyv1, putative n=1 Tax=Ricinus communis RepID=B9T3Y2_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Fyve finger-containing phosphoinositide kinase, fyv1, putative 9.927e-12
Putative Complete
sp_v3.0_unigene10308 SustainPine v3.0 321
AutoFact: 1-phosphatidylinositol-3-phosphate 5-kinase-like [Oryza sativa Japonica Group] 6.0e-38
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Fyve finger-containing phosphoinositide kinase, fyv1, putative 7.861e-12
Internal
sp_v3.0_unigene11558 SustainPine v3.0 857
AutoFact: 1-phosphatidylinositol-3-phosphate 5-kinase [Arabidopsis thaliana] dbj|BAE99133.1| hypothetical protein [Arabidopsis thaliana] gb|AEE86194.1| 1-phosphatidylinositol-3-phosphate 5-kinase [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Fyve finger-containing phosphoinositide kinase, fyv1, putative 8.514e-12
C-terminus
sp_v3.0_unigene11837 SustainPine v3.0 2045
AutoFact: Serine hydroxymethyltransferase n=2 Tax=Picea sitchensis RepID=B8LLP6_PICSI 0.0
FL-Next: sp=Serine hydroxymethyltransferase; Pinus pinaster (Maritime pine). 0.0
Complete
sp_v3.0_unigene12747 SustainPine v3.0 1041
AutoFact: serine hydroxymethyltransferase 7 [Arabidopsis thaliana] gb|AAO22567.1| putative hydroxymethyltransferase [Arabidopsis thaliana] gb|AEE31862.1| serine hydroxymethyltransferase 7 [Arabidopsis thaliana] 1.0e-33
FL-Next: sp=Serine hydroxymethyltransferase; Pinus pinaster (Maritime pine). 0.0
Sma3: Serine hydroxymethyltransferase 0.0
N-terminus
sp_v3.0_unigene17057 SustainPine v3.0 2046
AutoFact: Serine hydroxymethyltransferase n=2 Tax=Picea sitchensis RepID=B8LLP6_PICSI 0.0
FL-Next: sp=Serine hydroxymethyltransferase; Pinus pinaster (Maritime pine). 0.0
Complete
sp_v3.0_unigene24073 SustainPine v3.0 773
AutoFact: Mads box protein, putative n=1 Tax=Ricinus communis RepID=B9SMY1_RICCO 1.0e-23
FL-Next: tr=MADS box transcription factor; Pinus resinosa (Red pine) (Norway pine). 0.0
Sma3: AGAMOUS-like protein 3.474e-21
N-terminus
sp_v3.0_unigene25246 SustainPine v3.0 1608
AutoFact: TGA10 transcription factor n=1 Tax=Nicotiana tabacum RepID=Q52MZ2_TOBAC 0.0
FL-Next: sp=TGACG-sequence-specific DNA-binding protein TGA-2.1; Nicotiana tabacum (Common tobacco). 0.0
Sma3: BZIP transcription factor 4.659e-19
C-terminus
sp_v3.0_unigene30227 SustainPine v3.0 1998
AutoFact: Serine hydroxymethyltransferase n=2 Tax=Picea sitchensis RepID=A9NUX0_PICSI 0.0
FL-Next: sp=Serine hydroxymethyltransferase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene34787 SustainPine v3.0 680
AutoFact: MADS-box transcription factor 31 n=3 Tax=Andropogoneae RepID=B6TW19_MAIZE 4.0e-17
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Sma3: MADS-box protein 3.941e-17
Complete
sp_v3.0_unigene43475 SustainPine v3.0 160
AutoFact: Fyve finger-containing phosphoinositide kinase, fyv1, putative n=1 Tax=Ricinus communis RepID=B9T3Y2_RICCO 4.0e-22
FL-Next: tr=Fyve finger-containing phosphoinositide kinase, fyv1, putative; Ricinus communis (Castor bean). 0.0
Sma3: Fyve finger-containing phosphoinositide kinase, fyv1, putative 6.824e-08
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain