Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Actin-like

Term: IPR004000  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene128120 SustainPine v3.0 440
AutoFact: Actin, putative n=1 Tax=Ricinus communis RepID=B9SXZ4_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Actin 1.341e-18
Putative C-terminus
sp_v3.0_unigene128986 SustainPine v3.0 544
AutoFact: Ubiquitin n=1 Tax=Hemiselmis andersenii RepID=A9BLD1_HEMAN 4.0e-13
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative C-terminus
sp_v3.0_unigene129031 SustainPine v3.0 217
AutoFact: Ubiquitin family protein n=1 Tax=Trichinella spiralis RepID=E5RYS0_TRISP 2.0e-15
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ubiquitin 7.468e-07
C-terminus
sp_v3.0_unigene129324 SustainPine v3.0 405
AutoFact: Actin-11 n=180 Tax=Spermatophyta RepID=ACT11_ARATH 0.0
FL-Next: tr=Actin; Picea rubens (Red spruce) (Picea australis). 0.0
Sma3: Actin 5.957e-40
Putative C-terminus
sp_v3.0_unigene133089 SustainPine v3.0 456
AutoFact: Actin (Fragment) n=4 Tax=Spermatophyta RepID=ACT_PINCO 9.80909e-45
FL-Next: tr=Uncharacterized protein; Medicago truncatula (Barrel medic) (Medicago tribuloides). 0.0
Sma3: Actin 2.274e-22
Complete
sp_v3.0_unigene135634 SustainPine v3.0 256
AutoFact: PREDICTED: ubiquitin A-52 residue ribosomal protein fusion product 1 n=1 Tax=Rattus norvegicus RepID=UPI0001CF4A0F 9.0e-10
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative C-terminus
sp_v3.0_unigene135668 SustainPine v3.0 139
AutoFact: Ubiquitin n=1 Tax=Capsaspora owczarzaki ATCC 30864 RepID=E9CCU3_9EUKA 7.0e-13
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene135976 SustainPine v3.0 461
AutoFact: Actin-2 (Fragment) n=1 Tax=Ascaris suum RepID=F1LCH5_ASCSU 0.0
FL-Next: tr=Actin 2; Picea abies (Norway spruce) (Picea excelsa). 0.0
Sma3: Actin 1.671e-11
Internal
sp_v3.0_unigene137955 SustainPine v3.0 343
AutoFact: actin 6.0e-26
FL-Next: tr=Actin; Larix gmelinii. 0.0
Sma3: Actin 2.469e-31
C-terminus
sp_v3.0_unigene138300 SustainPine v3.0 308
AutoFact: Actin-11 n=180 Tax=Spermatophyta RepID=ACT11_ARATH 3.0e-37
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Actin 5.283e-16
Putative C-terminus
sp_v3.0_unigene141861 SustainPine v3.0 361
AutoFact: Polyubiquitin (Fragment) n=1 Tax=Lemna minor RepID=Q6B444_LEMMI 2.0e-17
FL-Next: tr=Putative polyubiquitin; Picea abies (Norway spruce) (Picea excelsa). 0.0
C-terminus
sp_v3.0_unigene143731 SustainPine v3.0 1128
AutoFact: Actin-11 n=180 Tax=Spermatophyta RepID=ACT11_ARATH 0.0
FL-Next: tr=Actin; Picea rubens (Red spruce) (Picea australis). 0.0
Sma3: Actin 0.0
C-terminus
sp_v3.0_unigene144340 SustainPine v3.0 265
AutoFact: Actin, putative n=1 Tax=Ricinus communis RepID=B9SXZ4_RICCO 3.0e-15
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Actin 1.778e-27
C-terminus
sp_v3.0_unigene145649 SustainPine v3.0 117
AutoFact: Actin (Fragment) n=3 Tax=Bonamia ostreae RepID=A9J0A9_9EUKA 1.0e-05
FL-Next: tr=Actin; Picea rubens (Red spruce) (Picea australis). 0.0
Internal
sp_v3.0_unigene145806 SustainPine v3.0 442
AutoFact: Actin-like protein (Fragment) n=6 Tax=Magnoliophyta RepID=E5L4N8_ONCHC 0.0
FL-Next: tr=Actin; Picea rubens (Red spruce) (Picea australis). 0.0
Sma3: Actin-2 1.064e-06
Internal
sp_v3.0_unigene145871 SustainPine v3.0 371
AutoFact: Actin, putative n=1 Tax=Ricinus communis RepID=B9SXZ4_RICCO 2.0e-31
FL-Next: tr=Actin; Picea rubens (Red spruce) (Picea australis). 0.0
Sma3: Actin 2.087e-24
Putative C-terminus
sp_v3.0_unigene145892 SustainPine v3.0 335
AutoFact: Actin (Fragment) n=1 Tax=Gladiolus hybrid cultivar RepID=Q6L655_9ASPA 3.0e-26
FL-Next: tr=Actin; Picea rubens (Red spruce) (Picea australis). 0.0
Sma3: Actin 3.637e-17
Internal
sp_v3.0_unigene145912 SustainPine v3.0 359
AutoFact: Actin-11 n=180 Tax=Spermatophyta RepID=ACT11_ARATH 3.0e-33
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Actin 4.973e-21
C-terminus
sp_v3.0_unigene146037 SustainPine v3.0 443
AutoFact: Actin, putative n=2 Tax=core eudicotyledons RepID=B9SXZ5_RICCO 0.0
FL-Next: tr=Actin; Picea rubens (Red spruce) (Picea australis). 0.0
Sma3: Actin-1 1.35e-09
N-terminus
sp_v3.0_unigene146177 SustainPine v3.0 389
AutoFact: Actin (Fragment) n=2 Tax=core eudicotyledons RepID=E3UU95_9ROSI 6.02558e-44
FL-Next: tr=Actin; Picea rubens (Red spruce) (Picea australis). 0.0
Misassembled

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain