Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: transcription elongation regulator activity

Term: GO:0003711  Help

Source: GO from Sma3

Ontology: Molecular Function


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene939 SustainPine v3.0 839
AutoFact: Mpp10 multi-domain protein 3.0e-06
coding
sp_v3.0_unigene997 SustainPine v3.0 1221
AutoFact: plastid transcriptionally active 13 [Arabidopsis thaliana] gb|AAK83588.1| AT3g09210/F3L24_8 [Arabidopsis thaliana] gb|AAM91077.1| AT3g09210/F3L24_8 [Arabidopsis thaliana] gb|AEE74738.1| plastid transcriptionally active 13 [Arabidopsis thaliana] 1.0e-31
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene1616 SustainPine v3.0 1556
AutoFact: putative elongation factor [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Transcription elongation factor s-II, putative 2.822e-11
Complete
sp_v3.0_unigene2292 SustainPine v3.0 846
AutoFact: SDA1 multi-domain protein 1.0e-10
coding
sp_v3.0_unigene3650 SustainPine v3.0 5676
AutoFact: transcription elongation factor SPT6 [Arabidopsis thaliana] gb|AEE34373.1| transcription elongation factor SPT6 [Arabidopsis thaliana] 0.0
FL-Next: sp=DNA-directed RNA polymerase E subunit 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Global transcription factor group 3.735e-10
Putative N-terminus
sp_v3.0_unigene6455 SustainPine v3.0 4010
AutoFact: RecName: Full=Putative transcription elongation factor SPT5 homolog 1 emb|CAB52557.1| putative protein [Arabidopsis thaliana] emb|CAB77960.1| putative protein [Arabidopsis thaliana] 0.0
FL-Next: sp=Putative transcription elongation factor SPT5 homolog 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: RNA polymerase II transcription elongation factor SPT5 8.893e-09
Complete
sp_v3.0_unigene10690 SustainPine v3.0 1777
AutoFact: putative elongation factor [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene18327 SustainPine v3.0 612
AutoFact: Mpp10 multi-domain protein 1.0e-06
coding
sp_v3.0_unigene20784 SustainPine v3.0 833
AutoFact: transcription elongation factor SPT6 [Arabidopsis thaliana] gb|AEE34374.1| transcription elongation factor SPT6 [Arabidopsis thaliana] 4.0e-28
FL-Next: tr=Putative uncharacterized protein; Selaginella moellendorffii (Spikemoss). 0.0
Sma3: Global transcription factor group 4.392e-07
Internal
sp_v3.0_unigene57923 SustainPine v3.0 94
AutoFact: Unassigned protein 8.0e-08
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene62032 SustainPine v3.0 300
AutoFact: T8F5.22 protein n=4 Tax=Arabidopsis thaliana RepID=O80815_ARATH 2.0e-36
FL-Next: tr=Putative uncharacterized protein OJ1579_G03.7; Oryza sativa subsp. japonica (Rice). 0.0
Sma3: Global transcription factor group 4.886e-10
N-terminus
sp_v3.0_unigene62074 SustainPine v3.0 266
AutoFact: Transcription elongation factor SPT6 (Fragment) n=1 Tax=Physcomitrella patens subsp. patens RepID=A9RRH2_PHYPA 3.0e-18
FL-Next: tr=Putative uncharacterized protein; Selaginella moellendorffii (Spikemoss). 0.0
Internal
sp_v3.0_unigene65042 SustainPine v3.0 159
AutoFact: Transcription termination factor nusG family protein n=2 Tax=Andropogoneae RepID=B6TZG2_MAIZE 5.0e-10
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene75777 SustainPine v3.0 363
AutoFact: [K] COG0250 Transcription antiterminator 3.0e-07
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene94686 SustainPine v3.0 473
AutoFact: Transcription elongation factor SPT6 (Fragment) n=1 Tax=Physcomitrella patens subsp. patens RepID=A9RRH2_PHYPA 0.0
FL-Next: tr=Putative uncharacterized protein; Selaginella moellendorffii (Spikemoss). 0.0
Sma3: Global transcription factor group 6.816e-07
Internal
sp_v3.0_unigene106460 SustainPine v3.0 711
AutoFact: transcription elongation factor SPT6 [Arabidopsis thaliana] gb|AEE34374.1| transcription elongation factor SPT6 [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Oryza sativa subsp. indica (Rice). 0.0
Sma3: Global transcription factor group 3.912e-10
Internal
sp_v3.0_unigene106651 SustainPine v3.0 353
AutoFact: SH2 motif; Alcohol dehydrogenase, zinc-containing; Resolvase, RNase H-like fold; Nucleic acid-binding, OB-fold, subgroup [Medicago truncatula] 9.99967e-42
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Sma3: Global transcription factor group 3.001e-10
Internal
sp_v3.0_unigene113733 SustainPine v3.0 256
AutoFact: MCM2_N multi-domain protein 4.0e-05
unknown
sp_v3.0_unigene115908 SustainPine v3.0 224
AutoFact: SH2 motif; Alcohol dehydrogenase, zinc-containing; Resolvase, RNase H-like fold; Nucleic acid-binding, OB-fold, subgroup n=1 Tax=Medicago truncatula RepID=Q2HUT6_MEDTR 3.0e-07
FL-Next: tr=LCR/BET1; Medicago truncatula (Barrel medic) (Medicago tribuloides). 0.0
Internal
sp_v3.0_unigene117632 SustainPine v3.0 290
AutoFact: SH2 motif; Alcohol dehydrogenase, zinc-containing; Resolvase, RNase H-like fold; Nucleic acid-binding, OB-fold, subgroup n=1 Tax=Medicago truncatula RepID=Q2HUT6_MEDTR 8.0e-12
FL-Next: tr=Uncharacterized protein; Glycine max (Soybean) (Glycine hispida). 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain