Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: rRNA binding

Term: GO:0019843  Help

Source: GO from Sma3

Ontology: Molecular Function

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene77690 SustainPine v3.0 395
• AutoFact: 40S ribosomal protein S18 [Botryotinia fuckeliana B05.10] ref|XP_001586515.1| 40S ribosomal protein S18 [Sclerotinia sclerotiorum 1980] gb|EDN21692.1| 40S ribosomal protein S18 [Botryotinia fuckeliana B05.10] gb|EDN97648.1| 40S ribosomal protein S18 [Scle 1.99993e-41
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S18 8.45e-12
C-terminus
sp_v3.0_unigene78220 SustainPine v3.0 240
• AutoFact: 40S ribosomal protein S4 n=1 Tax=Postia placenta Mad-698-R RepID=B8P7G3_POSPM 1.0e-32
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S4 1.61e-20
Internal
sp_v3.0_unigene78512 SustainPine v3.0 289
• AutoFact: 60S ribosomal protein l12 [Oryza sativa Indica Group] 3.0e-17
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L12 3.328e-17
Putative C-terminus
sp_v3.0_unigene78523 SustainPine v3.0 181
• AutoFact: Plastid/chloroplast ribosomal protein L24 n=1 Tax=Volvox carteri f. nagariensis RepID=D8U0H3_VOLCA 4.0e-13
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: CL24 1.354e-12
Putative C-terminus
sp_v3.0_unigene78565 SustainPine v3.0 251
• AutoFact: Ribosomal protein n=1 Tax=Picea sitchensis RepID=A9P244_PICSI 5.0e-26
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 50S ribosomal protein L1, chloroplastic 0.0
Internal
sp_v3.0_unigene78717 SustainPine v3.0 162
• AutoFact: 60S ribosomal protein L11 n=4 Tax=Agaricomycetes RepID=B8P5N8_POSPM 2.0e-22
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein L11 2.963e-11
Internal
sp_v3.0_unigene79024 SustainPine v3.0 388
• AutoFact: 37S ribosomal protein S12 n=2 Tax=Metarhizium RepID=E9E299_METAQ 1.0e-35
• FL-Next: sp=Ribosomal protein S12, mitochondrial; Pinus sylvestris (Scots pine). Mitochondrion. 0.0
• Sma3: Ribosomal protein S12 0.0
C-terminus
sp_v3.0_unigene79432 SustainPine v3.0 289
• AutoFact: Ribosomal protein S11, component of cytosolic 80S ribosome and 40S small subunit n=1 Tax=Ostreococcus lucimarinus CCE9901 RepID=A4RYN3_OSTLU 4.0e-27
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S11 6.028e-21
N-terminus
sp_v3.0_unigene79588 SustainPine v3.0 372
• AutoFact: 40S ribosomal protein S17 n=2 Tax=Pucciniales RepID=E3K2S4_PUCGT 5.0e-37
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S11 2.109e-24
N-terminus
sp_v3.0_unigene79750 SustainPine v3.0 349
• AutoFact: 40S ribosomal protein S4 [Meyerozyma guilliermondii ATCC 6260] gb|EDK38739.1| 40S ribosomal protein S4 [Meyerozyma guilliermondii ATCC 6260] 2.0e-27
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S4 1.719e-20
C-terminus
sp_v3.0_unigene79814 SustainPine v3.0 354
• AutoFact: 40S ribosomal protein S18 n=22 Tax=Embryophyta RepID=RS18_ARATH 8.0e-29
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S18 5.027e-08
N-terminus
sp_v3.0_unigene80028 SustainPine v3.0 352
• AutoFact: 40S ribosomal protein S4, putative n=1 Tax=Pediculus humanus corporis RepID=E0W344_PEDHC 4.06377e-44
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S4 4.563e-24
Internal
sp_v3.0_unigene80835 SustainPine v3.0 347
• AutoFact: 60S ribosomal protein l11 (Fragment) n=3 Tax=Magnoliophyta RepID=E5GC34_CUCME 5.0e-35
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein L11 2.667e-11
C-terminus
sp_v3.0_unigene81152 SustainPine v3.0 245
• AutoFact: 40S ribosomal protein S9 , putative [Solanum demissum] 4.0e-14
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S9 2.316e-19
N-terminus
sp_v3.0_unigene81198 SustainPine v3.0 210
• AutoFact: L11 n=1 Tax=Suberites domuncula RepID=Q4KTH5_SUBDO 5.0e-27
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein L11 2.391e-11
Putative C-terminus
sp_v3.0_unigene81375 SustainPine v3.0 128
• AutoFact: 40s ribosomal protein s4, putative [Toxoplasma gondii RH] 2.0e-11
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S4 3.858e-17
Internal
sp_v3.0_unigene81548 SustainPine v3.0 159
• AutoFact: Ribosomal protein L37 n=4 Tax=Tremellaceae RepID=E6R2B3_CRYGW 1.0e-11
• FL-Next: sp=Ribosomal protein L37; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein L37 0.0
Internal
sp_v3.0_unigene84077 SustainPine v3.0 284
• AutoFact: DUF3729 multi-domain protein 1.0e-08
coding
sp_v3.0_unigene93628 SustainPine v3.0 1519
• AutoFact: ribosomal protein L19 [Arabidopsis thaliana] emb|CAB39934.1| putative protein [Arabidopsis thaliana] emb|CAB78206.1| putative protein [Arabidopsis thaliana] gb|AAS76282.1| At4g11630 [Arabidopsis thaliana] dbj|BAD94523.1| putative protein [Arabidopsis thal 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 50S ribosomal protein L19, putative 9.54e-13
Complete
sp_v3.0_unigene96711 SustainPine v3.0 1159
• AutoFact: Ribosomal protein S4 n=1 Tax=Cycas taitungensis RepID=B0BLG9_CYCTA 0.0
• FL-Next: sp=30S ribosomal protein S4, chloroplastic; verticillata). Plastid; Chloroplast. 0.0
• Sma3: Ribosomal protein S4 3.55299e-41
Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain