Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: rRNA binding

Term: GO:0019843  Help

Source: GO from Sma3

Ontology: Molecular Function

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene27194 SustainPine v3.0 705
• AutoFact: 50S ribosomal protein L2 n=6 Tax=cellular organisms RepID=RL2_FLAJ1 0.0
• FL-Next: sp=30S ribosomal protein S19, chloroplastic; Pinus aristata. Plastid; Chloroplast. 0.0
• Sma3: 50S ribosomal protein L2, chloroplastic 0.0
Putative Complete
sp_v3.0_unigene27296 SustainPine v3.0 610
• AutoFact: Ribosomal protein S9, component of cytosolic 80S ribosome and 40S small subunit n=3 Tax=Chlamydomonadales RepID=A8JGF8_CHLRE 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S9 1.54143e-44
Complete
sp_v3.0_unigene27455 SustainPine v3.0 581
• AutoFact: 60S ribosomal protein L12 n=3 Tax=Caenorhabditis RepID=RL12_CAEEL 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L12 7.541e-15
Complete
sp_v3.0_unigene27968 SustainPine v3.0 831
• AutoFact: S4 n=1 Tax=Suberites domuncula RepID=Q4KTD8_SUBDO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S4 4.563e-24
Complete
sp_v3.0_unigene28016 SustainPine v3.0 525
• AutoFact: 30S ribosomal protein S12 n=5 Tax=Flavobacteriales RepID=C7M4E1_CAPOD 0.0
• FL-Next: sp=30S ribosomal protein S12, chloroplastic; Keteleeria davidiana (David's keteleeria) (Pseudotsuga davidiana). Plastid; Chloroplast. 0.0
• Sma3: 30S ribosomal protein S12, chloroplastic 0.0
Complete
sp_v3.0_unigene29786 SustainPine v3.0 799
• AutoFact: 30S ribosomal protein S20, putative n=1 Tax=Ricinus communis RepID=B9T1X1_RICCO 4.0e-30
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene30044 SustainPine v3.0 1106
• AutoFact: 40S ribosomal protein S9, putative n=5 Tax=fabids RepID=B9RUP5_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene30769 SustainPine v3.0 572
• AutoFact: Ribosomal protein S18 n=4 Tax=Arachnida RepID=A6N9R2_ORNPR 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S18 8.064e-12
Putative Complete
sp_v3.0_unigene30802 SustainPine v3.0 653
• AutoFact: ribosomal protein L11, putative [Toxoplasma gondii ME49] gb|EEA97088.1| ribosomal protein L11, putative [Toxoplasma gondii ME49] gb|EEE25534.1| ribosomal protein L11, putative [Toxoplasma gondii GT1] gb|EEE32699.1| ribosomal protein L11, putative [Toxopla 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein L11 3.151e-11
Complete
sp_v3.0_unigene30901 SustainPine v3.0 606
• AutoFact: 60S ribosomal protein L11 (Fragment) n=2 Tax=Ixodoidea RepID=A6NA04_ORNPR 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein L11 2.963e-11
Complete
sp_v3.0_unigene30902 SustainPine v3.0 628
• AutoFact: Putative 40S ribosomal protein RPS9 n=1 Tax=Flustra foliacea RepID=A9UDN8_9BILA 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S9 1.82169e-44
Complete
sp_v3.0_unigene30917 SustainPine v3.0 653
• AutoFact: Ribosomal protein rpl12 n=1 Tax=Eurythoe complanata RepID=A8UG21_EURCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L12 7.708e-19
Complete
sp_v3.0_unigene30959 SustainPine v3.0 563
• AutoFact: Ribosomal protein S18 n=4 Tax=Arachnida RepID=A6N9R2_ORNPR 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S18 8.064e-12
Complete
sp_v3.0_unigene30960 SustainPine v3.0 537
• AutoFact: putative ribosomal protein S11 [Maconellicoccus hirsutus] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S11 5.115e-28
Complete
sp_v3.0_unigene31040 SustainPine v3.0 590
• AutoFact: 60S ribosomal protein L12 n=1 Tax=Salpingoeca sp. ATCC 50818 RepID=F2U108_9EUKA 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L12 7.917e-19
Complete
sp_v3.0_unigene31089 SustainPine v3.0 684
• AutoFact: Putative 60S ribosomal protein RPL12 n=1 Tax=Phoronis muelleri RepID=B2YI34_9BILA 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L12 7.708e-19
Complete
sp_v3.0_unigene31138 SustainPine v3.0 691
• AutoFact: 40S ribosomal protein S9, putative n=1 Tax=Pediculus humanus corporis RepID=E0VX17_PEDHC 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S9 2.24208e-44
Complete
sp_v3.0_unigene31159 SustainPine v3.0 367
• AutoFact: Ribosomal protein L37 n=1 Tax=Phytophthora infestans T30-4 RepID=D0NDA7_PHYIT 2.0e-33
• FL-Next: sp=Ribosomal protein L37; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein L37 0.0
Complete
sp_v3.0_unigene31208 SustainPine v3.0 554
• AutoFact: 40S ribosomal protein S18 [Botryotinia fuckeliana B05.10] ref|XP_001586515.1| 40S ribosomal protein S18 [Sclerotinia sclerotiorum 1980] gb|EDN21692.1| 40S ribosomal protein S18 [Botryotinia fuckeliana B05.10] gb|EDN97648.1| 40S ribosomal protein S18 [Scle 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S18 8.064e-12
Complete
sp_v3.0_unigene31276 SustainPine v3.0 575
• AutoFact: S9 n=1 Tax=Suberites domuncula RepID=Q4KTD3_SUBDO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S9 2.10195e-44
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain