Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: rRNA binding

Term: GO:0019843  Help

Source: GO from Sma3

Ontology: Molecular Function

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene205509 SustainPine v3.0 406
• AutoFact: 40S ribosomal protein S4 [Bombyx mori] sp|Q5UAP0.1|RS4_BOMMO RecName: Full=40S ribosomal protein S4 gb|AAV34860.1| ribosomal protein S4 [Bombyx mori] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S4 3.955e-24
Internal
sp_v3.0_unigene205541 SustainPine v3.0 466
• AutoFact: Putative 60S ribosomal protein RPL11 n=1 Tax=Phoronis muelleri RepID=B2YI33_9BILA 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein L11 2.963e-11
Putative C-terminus
sp_v3.0_unigene205581 SustainPine v3.0 456
• AutoFact: 40S ribosomal protein S9, putative n=3 Tax=Perkinsus marinus ATCC 50983 RepID=C5KAJ3_9ALVE 9.99995e-41
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S9 9.80909e-45
C-terminus
sp_v3.0_unigene205690 SustainPine v3.0 357
• AutoFact: [J] COG0522 Ribosomal protein S4 and related proteins 5.0e-36
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S9 1.621e-29
N-terminus
sp_v3.0_unigene206065 SustainPine v3.0 580
• AutoFact: 60S ribosomal protein L12 n=1 Tax=Salpingoeca sp. ATCC 50818 RepID=F2U108_9EUKA 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L12 7.541e-15
Complete
sp_v3.0_unigene206562 SustainPine v3.0 732
• AutoFact: 40S ribosomal protein S18 [Arabidopsis thaliana] ref|NP_192718.1| 40S ribosomal protein S18 [Arabidopsis thaliana] ref|NP_564434.1| 40S ribosomal protein S18 [Arabidopsis thaliana] ref|XP_002872461.1| hypothetical protein ARALYDRAFT_489832 [Arabidopsis ly 1.4013e-45
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S18 8.581e-12
Complete
sp_v3.0_unigene206601 SustainPine v3.0 695
• AutoFact: 30S ribosomal protein S13 [Arabidopsis thaliana] sp|P42732.1|RR13_ARATH RecName: Full=30S ribosomal protein S13, chloroplastic; AltName: Full=CS13; Flags: Precursor emb|CAA79013.1| chloroplast 30S ribosomal protein S13 [Arabidopsis thaliana] emb|CAA88028. 2.0e-27
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein S13, chloroplast 5.237e-09
Putative Complete
sp_v3.0_unigene206729 SustainPine v3.0 559
• AutoFact: 40S ribosomal protein S9, putative n=5 Tax=fabids RepID=B9RUP5_RICCO 2.0e-27
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S9 1.54143e-44
Complete
sp_v3.0_unigene207287 SustainPine v3.0 656
• AutoFact: 60S ribosomal protein L12 n=3 Tax=Hypocreales RepID=E9EUF4_METAR 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L12 7.917e-19
Complete
sp_v3.0_unigene207862 SustainPine v3.0 439
• AutoFact: Ribosomal protein L37 n=1 Tax=Picea sitchensis RepID=A9NJS5_PICSI 3.0e-25
• FL-Next: sp=Ribosomal protein L37; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein L37 0.0
Complete
sp_v3.0_unigene208047 SustainPine v3.0 224
• AutoFact: 40S ribosomal protein S11-1 n=11 Tax=core eudicotyledons RepID=RS111_ARATH 2.0e-06
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S11 8.625e-11
N-terminus
sp_v3.0_unigene208466 SustainPine v3.0 431
• AutoFact: 40S ribosomal protein S4-1 [Arabidopsis thaliana] sp|Q93VH9.1|RS41_ARATH RecName: Full=40S ribosomal protein S4-1 gb|AAK43846.1|AF370469_1 Unknown protein [Arabidopsis thaliana] gb|AAK59636.1| putative ribosomal protein S4 [Arabidopsis thaliana] gb|AAL341 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S4 4.456e-24
N-terminus
sp_v3.0_unigene208898 SustainPine v3.0 188
• AutoFact: 60S ribosomal protein L11-1 n=51 Tax=Embryophyta RepID=RL111_ARATH 9.0e-18
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein L11 2.086e-11
N-terminus
sp_v3.0_unigene209205 SustainPine v3.0 567
• AutoFact: 40S ribosomal protein S9, putative n=5 Tax=fabids RepID=B9RUP5_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative uncharacterized protein 0.0
C-terminus
sp_v3.0_unigene209319 SustainPine v3.0 510
• AutoFact: 40S ribosomal protein S11 (Fragment) n=1 Tax=Cyanophora paradoxa RepID=O65766_CYAPA 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S11 4.333e-28
Putative Complete
sp_v3.0_unigene209325 SustainPine v3.0 579
• AutoFact: Ribosomal protein L12e n=1 Tax=Timarcha balearica RepID=Q4GXJ1_TIMBA 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L12 7.917e-19
Complete
sp_v3.0_unigene209519 SustainPine v3.0 626
• AutoFact: 60S ribosomal protein L25 n=2 Tax=Metarhizium RepID=E9DWA0_METAQ 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L23a 2.412e-10
Putative Complete
sp_v3.0_unigene209521 SustainPine v3.0 223
• AutoFact: 40S ribosomal protein S11-1 n=11 Tax=core eudicotyledons RepID=RS111_ARATH 2.0e-06
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S11 8.625e-11
N-terminus
sp_v3.0_unigene210358 SustainPine v3.0 895
• AutoFact: 40S ribosomal protein S9, putative n=5 Tax=fabids RepID=B9RUP5_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative uncharacterized protein 0.0
C-terminus
sp_v3.0_unigene210444 SustainPine v3.0 366
• AutoFact: 40S ribosomal protein S11-1 n=11 Tax=core eudicotyledons RepID=RS111_ARATH 2.0e-06
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S11 8.625e-11
N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain