Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: rRNA binding

Term: GO:0019843  Help

Source: GO from Sma3

Ontology: Molecular Function

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene23426 SustainPine v3.0 400
• AutoFact: Ribosomal protein L37 n=1 Tax=Eurythoe complanata RepID=A8UGE9_EURCO 4.0e-37
• FL-Next: sp=Ribosomal protein L37; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein L37 0.0
Complete
sp_v3.0_unigene23869 SustainPine v3.0 866
• AutoFact: Ribosomal protein S4 (Fragment) n=1 Tax=Lepidochitona cinerea RepID=E3P7G6_9MOLL 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S4 3.955e-24
Putative Complete
sp_v3.0_unigene23876 SustainPine v3.0 447
• AutoFact: 40S ribosomal protein S11, putative n=1 Tax=Perkinsus marinus ATCC 50983 RepID=C5KXR1_9ALVE 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S11 4.333e-28
Putative Complete
sp_v3.0_unigene23938 SustainPine v3.0 514
• AutoFact: Ribosomal protein S4e n=1 Tax=Lygus lineolaris RepID=A5HMP6_LYGLI 3.0e-38
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S4 2.176e-20
C-terminus
sp_v3.0_unigene24427 SustainPine v3.0 630
• AutoFact: Ribosomal protein S7 n=1 Tax=Cycas taitungensis RepID=B0BLH1_CYCTA 0.0
• FL-Next: sp=30S ribosomal protein S7, chloroplastic; Pinus amamiana. Plastid; Chloroplast. 0.0
• Sma3: Ribosomal protein S7 3.087e-31
N-terminus
sp_v3.0_unigene24559 SustainPine v3.0 916
• AutoFact: Ribosomal protein S4 (Fragment) n=1 Tax=Lepidochitona cinerea RepID=E3P7G6_9MOLL 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S4 4.563e-24
Complete
sp_v3.0_unigene25351 SustainPine v3.0 543
• AutoFact: 30S ribosomal protein S12 n=2 Tax=Pyrenophora RepID=B2WGH1_PYRTR 0.0
• FL-Next: sp=30S ribosomal protein S12, chloroplastic; Keteleeria davidiana (David's keteleeria) (Pseudotsuga davidiana). Plastid; Chloroplast. 0.0
• Sma3: Ribosomal protein S12 0.0
Putative Complete
sp_v3.0_unigene25481 SustainPine v3.0 1021
• AutoFact: 30S ribosomal protein S20, putative n=1 Tax=Ricinus communis RepID=B9T1X1_RICCO 4.0e-31
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene25664 SustainPine v3.0 523
• AutoFact: 40S ribosomal protein S4 n=1 Tax=Phytophthora infestans T30-4 RepID=D0NM53_PHYIT 1.00053e-42
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S4 2.176e-20
C-terminus
sp_v3.0_unigene25881 SustainPine v3.0 421
• AutoFact: 40S ribosomal protein S18 n=5 Tax=Deuterostomia RepID=RS18_BRABE 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S18 8.064e-12
C-terminus
sp_v3.0_unigene25929 SustainPine v3.0 550
• AutoFact: YALI0B15103p n=1 Tax=Yarrowia lipolytica CLIB122 RepID=Q6CEJ8_YARLI 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein L11 3.907e-11
Complete
sp_v3.0_unigene25946 SustainPine v3.0 389
• AutoFact: 40S ribosomal protein S11, putative n=1 Tax=Perkinsus marinus ATCC 50983 RepID=C5KXR1_9ALVE 1.96182e-44
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S11 5.401e-28
C-terminus
sp_v3.0_unigene25954 SustainPine v3.0 498
• AutoFact: ribosomal protein S4 1.99965e-42
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S4 4.25e-24
C-terminus
sp_v3.0_unigene26217 SustainPine v3.0 550
• AutoFact: ribosomal protein S4e [Biphyllus lunatus] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S4 4.456e-24
N-terminus
sp_v3.0_unigene26399 SustainPine v3.0 639
• AutoFact: 30S ribosomal protein S11 n=4 Tax=cellular organisms RepID=RS11_FLAJ1 0.0
• FL-Next: sp=30S ribosomal protein S11, chloroplastic; Pseudotsuga sinensis var. wilsoniana. Plastid; Chloroplast. 0.0
• Sma3: 30S ribosomal protein S11, chloroplastic 0.0
Complete
sp_v3.0_unigene26548 SustainPine v3.0 359
• AutoFact: 60S ribosomal protein L11 [Neosartorya fischeri NRRL 181] gb|EAW25351.1| 60S ribosomal protein L11 [Neosartorya fischeri NRRL 181] 8.0e-38
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein L11 3.151e-11
N-terminus
sp_v3.0_unigene26750 SustainPine v3.0 396
• AutoFact: Ribosomal protein L12e n=1 Tax=Scarabaeus laticollis RepID=Q4GXJ3_SCALT 2.0e-38
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L12 6.004e-15
C-terminus
sp_v3.0_unigene26915 SustainPine v3.0 1326
• AutoFact: [J] COG0093 Ribosomal protein L14 6.0e-28
• FL-Next: sp=50S ribosomal protein L14, chloroplastic; Abies firma (Momi fir). Plastid; Chloroplast. 0.0
• Sma3: 50S ribosomal protein L14, chloroplastic 0.0
Complete
sp_v3.0_unigene26936 SustainPine v3.0 166
• AutoFact: RS11, ribosomal protein 11 40S small ribosomal subunit n=1 Tax=Thalassiosira pseudonana RepID=B8C1P3_THAPS 5.0e-10
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene27190 SustainPine v3.0 805
• AutoFact: S4 n=1 Tax=Suberites domuncula RepID=Q4KTD8_SUBDO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S4 5.496e-24
Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain