Sustainpine_db
HomeAssembliesBLASTSearchInstitutions

Assembly Name: SustainPine v3.0

Name: Chromosome chr8 scaffold_29, whole genome shotgun sequence

Source: Description from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene3244 SustainPine v3.0 3606
AutoFact: ethylene signaling protein [Solanum lycopersicum] 0.0
FL-Next: sp=Ethylene-insensitive protein 2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Chromosome chr8 scaffold_29, whole genome shotgun sequence 2.288e-06
C-terminus
sp_v3.0_unigene10662 SustainPine v3.0 2937
AutoFact: [O] COG0464 ATPases of the AAA+ class 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Chromosome chr8 scaffold_29, whole genome shotgun sequence 0.0
Complete
sp_v3.0_unigene11804 SustainPine v3.0 2985
AutoFact: RecName: Full=Cell division cycle protein 48 homolog; AltName: Full=Valosin-containing protein homolog; Short=VCP gb|AAA80587.1| valosin-containing protein [Glycine max] gb|ABC87759.1| plamsma membrane-associated AAA-ATPase [Glycine max] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Chromosome chr8 scaffold_29, whole genome shotgun sequence 0.0
Complete
sp_v3.0_unigene13784 SustainPine v3.0 1819
AutoFact: TerC integral membrane domain-containing protein [Arabidopsis thaliana] gb|AED91766.1| TerC integral membrane domain-containing protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Sma3: Chromosome chr8 scaffold_29, whole genome shotgun sequence 0.0
Complete
sp_v3.0_unigene28419 SustainPine v3.0 2692
AutoFact: predicted protein n=1 Tax=Physcomitrella patens subsp. patens RepID=UPI0001621F83 0.0
FL-Next: sp=DNA topoisomerase 6 subunit A; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Chromosome chr8 scaffold_29, whole genome shotgun sequence 0.0
Complete
sp_v3.0_unigene34053 SustainPine v3.0 2580
AutoFact: RecName: Full=Cell division cycle protein 48 homolog; AltName: Full=Valosin-containing protein homolog; Short=VCP gb|AAA80587.1| valosin-containing protein [Glycine max] gb|ABC87759.1| plamsma membrane-associated AAA-ATPase [Glycine max] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Chromosome chr8 scaffold_29, whole genome shotgun sequence 0.0
Complete

Go to Annotations List

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain