Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: two-component signal transduction system (phosphorelay)

Term: GO:0000160  Help

Source: GO from Sma3

Ontology: Biological Process

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene28796 SustainPine v3.0 2642
• AutoFact: Hpt sensor hybrid histidine kinase [Halorhodospira halophila SL1] gb|ABM62915.1| Hpt sensor hybrid histidine kinase [Halorhodospira halophila SL1] 5.0e-35
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Predicted protein 0.0
Complete
sp_v3.0_unigene28846 SustainPine v3.0 906
• AutoFact: sensory histidine protein kinase n=1 Tax=Physcomitrella patens subsp. patens RepID=UPI00016210DC 1.0e-18
• FL-Next: tr=Sensory histidine protein kinase; Selaginella moellendorffii (Spikemoss). 0.0
• Sma3: Sensory histidine protein kinase 7.252e-31
Internal
sp_v3.0_unigene28903 SustainPine v3.0 2814
• AutoFact: Timing of CAB expression 1 protein n=1 Tax=Castanea sativa RepID=Q56TL2_CASSA 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Timing of CAB expression 1 6.363e-09
Complete
sp_v3.0_unigene28922 SustainPine v3.0 1045
• AutoFact: sensory histidine protein kinase n=1 Tax=Physcomitrella patens subsp. patens RepID=UPI00016210DC 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Sensory histidine protein kinase 7.177e-08
C-terminus
sp_v3.0_unigene28994 SustainPine v3.0 2834
• AutoFact: Serine/threonine protein kinase, putative n=1 Tax=Ricinus communis RepID=B9SWQ3_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Phototropin 1.8e-35
Complete
sp_v3.0_unigene29475 SustainPine v3.0 1167
• AutoFact: putative histidine-containing phosphotransfer protein 2 [Populus x canadensis] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene30694 SustainPine v3.0 390
• AutoFact: histidine-containing phosphotransfer protein [Catharanthus roseus] 1.0e-27
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Histidine phosphotransfer protein 3.608e-37
N-terminus
sp_v3.0_unigene33408 SustainPine v3.0 312
• AutoFact: Phytochrome n=43 Tax=Spermatophyta RepID=PHY_PINSY 2.0e-17
• FL-Next: sp=Phytochrome; Pinus sylvestris (Scots pine). 0.0
• Sma3: Phytochrome 3.338e-10
C-terminus
sp_v3.0_unigene33430 SustainPine v3.0 475
• AutoFact: Phytochrome n=43 Tax=Spermatophyta RepID=PHY_PINSY 2.0e-17
• FL-Next: sp=Phytochrome; Pinus sylvestris (Scots pine). 0.0
• Sma3: Phytochrome 3.338e-10
C-terminus
sp_v3.0_unigene34728 SustainPine v3.0 675
• AutoFact: PREDICTED: similar to cytokinin receptor 1 n=1 Tax=Vitis vinifera RepID=UPI00019828F5 0.0
• FL-Next: Isoform 2 of Histidine kinase 4 OS=Arabidopsis thaliana GN=AHK4 0.0
• Sma3: Histidine kinase 3.611e-22
Internal
sp_v3.0_unigene34729 SustainPine v3.0 661
• AutoFact: ubiquitin ligase protein cop1, putative (EC:1.3.1.74); K10143 E3 ubiquitin-protein ligase RFWD2 [EC:6.3.2.19] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ubiquitin ligase protein cop1, putative 9.041e-14
C-terminus
sp_v3.0_unigene35103 SustainPine v3.0 990
• AutoFact: Response regulator receiver:ATP-binding region, ATPase-like protein [Alteromonas macleodii str. 'Deep ecotype'] gb|AEA99339.1| Response regulator receiver:ATP-binding region, ATPase-like protein [Alteromonas macleodii str. 'Deep ecotype'] 4.0e-15
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene35402 SustainPine v3.0 1128
• AutoFact: histidine-containing phosphotransfer protein [Catharanthus roseus] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Histidine phosphotransfer protein 1.03696e-43
Complete
sp_v3.0_unigene36967 SustainPine v3.0 826
• AutoFact: histidine-containing phosphotransfer protein [Catharanthus roseus] 1.0e-16
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Histidine phosphotransfer protein 2.238e-26
Putative Complete
sp_v3.0_unigene37076 SustainPine v3.0 673
• AutoFact: Signal Transduction Histidine Kinase (STHK) with CheB and CheR activity n=1 Tax=Cyanothece sp. CCY0110 RepID=A3IKI3_9CHRO 1.0e-27
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Sensory histidine protein kinase 9.183e-08
Putative N-terminus
sp_v3.0_unigene37401 SustainPine v3.0 687
• AutoFact: protein kinase domain-containing protein [Arabidopsis thaliana] gb|AAD30630.1|AC006085_3 Similar to protein kinases [Arabidopsis thaliana] gb|AAG50535.1|AC079828_6 serine/threonine protein kinase, putative [Arabidopsis thaliana] dbj|BAF01247.1| putative s 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Phototropin 1.378e-29
Internal
sp_v3.0_unigene38673 SustainPine v3.0 1776
• AutoFact: serine/threonine-protein kinase AtPK1/AtPK6 [Arabidopsis thaliana] sp|P42818.1|KPK1_ARATH RecName: Full=Serine/threonine-protein kinase AtPK1/AtPK6; AltName: Full=Ribosomal-protein S6 kinase homolog 1 gb|AAG51351.1|AC012562_12 putative ribosomal-protein S 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Phototropin 2.632e-11
Complete
sp_v3.0_unigene39039 SustainPine v3.0 394
• AutoFact: histidine kinase-like protein [Arabidopsis thaliana] 1.0e-37
• FL-Next: sp=Histidine kinase 5; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: Cytokinin receptor AtCKI2-like protein 2.22e-16
Internal
sp_v3.0_unigene39467 SustainPine v3.0 337
• AutoFact: PREDICTED: similar to cytokinin receptor 1 n=1 Tax=Vitis vinifera RepID=UPI00019828F5 8.40779e-45
• FL-Next: Isoform 2 of Histidine kinase 4 OS=Arabidopsis thaliana GN=AHK4 0.0
• Sma3: Histidine kinase 1.108e-31
Internal
sp_v3.0_unigene40222 SustainPine v3.0 156
• AutoFact: cold inducible histidine kinase 1 [Catharanthus roseus] 9.0e-08
• FL-Next: sp=Histidine kinase 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain