Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: AT hook, DNA-binding motif

Term: IPR017956  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene54027 SustainPine v3.0 192
AutoFact: Androgen induced inhibitor of proliferation (As3) / pds5, putative n=1 Tax=Ricinus communis RepID=B9RJ83_RICCO 2.0e-18
FL-Next: tr=Androgen induced inhibitor of proliferation (As3) / pds5, putative; Ricinus communis (Castor bean). 0.0
Sma3: Androgen induced inhibitor of proliferation (As3) / pds5, putative 4.494e-10
Internal
sp_v3.0_unigene54144 SustainPine v3.0 177
AutoFact: histone-like protein [Fritillaria liliacea] 1.0e-13
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Histone H1 4.40568e-42
Putative N-terminus
sp_v3.0_unigene54472 SustainPine v3.0 485
AutoFact: Transcription factor, putative n=1 Tax=Ricinus communis RepID=B9RSE9_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: ENBP1 protein 4.26e-08
N-terminus
sp_v3.0_unigene57780 SustainPine v3.0 124
AutoFact: Unassigned protein
FL-Next: tr=Chromatin remodeling complex subunit; subsp. trichocarpa). 0.0
Putative N-terminus
sp_v3.0_unigene58188 SustainPine v3.0 449
AutoFact: Unassigned protein
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Internal
sp_v3.0_unigene58240 SustainPine v3.0 439
AutoFact: Unassigned protein
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Internal
sp_v3.0_unigene59431 SustainPine v3.0 504
AutoFact: putative AT-Hook DNA-binding protein [Oryza sativa Japonica Group] gb|ABB48013.2| AT-hook protein 1, putative, expressed [Oryza sativa Japonica Group] gb|ABB48012.2| AT-hook protein 1, putative, expressed [Oryza sativa Japonica Group] gb|EAY79603.1| hypot 6.0e-11
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: AT-hook protein 1 5.114e-19
Putative N-terminus
sp_v3.0_unigene59943 SustainPine v3.0 321
AutoFact: Transcription factor, putative n=1 Tax=Ricinus communis RepID=B9RSE9_RICCO 9.0e-37
FL-Next: tr=Transcription factor, putative; Ricinus communis (Castor bean). 0.0
Sma3: ENBP1 protein 3.069e-08
Internal
sp_v3.0_unigene62061 SustainPine v3.0 240
AutoFact: DNA ligase 4 n=2 Tax=Arabidopsis RepID=DNLI4_ARATH 3.0e-28
FL-Next: sp=DNA ligase 4; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: DNA ligase 5.004e-10
Internal
sp_v3.0_unigene62444 SustainPine v3.0 248
AutoFact: DNA ligase n=1 Tax=Populus trichocarpa RepID=B9IN68_POPTR 2.0e-08
FL-Next: sp=Putative DNA ligase 4; Oryza sativa subsp. japonica (Rice). 0.0
Sma3: DNA ligase 6.707e-10
Internal
sp_v3.0_unigene62720 SustainPine v3.0 292
AutoFact: PREDICTED: similar to PIE1 (PHOTOPERIOD-INDEPENDENT EARLY FLOWERING 1); ATP binding / DNA binding / helicase n=1 Tax=Vitis vinifera RepID=UPI0001983E18 1.0e-27
FL-Next: sp=DNA helicase INO80; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: SWR1 complex protein, SNF2 family DNA-dependent ATPase 6.904e-09
Internal
sp_v3.0_unigene63388 SustainPine v3.0 304
AutoFact: Microtubule-associated protein MAP65-1a n=1 Tax=Nicotiana tabacum RepID=Q9FEV9_TOBAC 5.0e-29
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Microtubule-associated protein MAP65-1a 1.629e-29
Internal
sp_v3.0_unigene63874 SustainPine v3.0 209
AutoFact: Stromal antigen, putative n=1 Tax=Ricinus communis RepID=B9S3Y7_RICCO 5.0e-15
FL-Next: tr=Stromal antigen, putative; Ricinus communis (Castor bean). 0.0
Sma3: Stromal antigen, putative 5.7e-11
Internal
sp_v3.0_unigene64037 SustainPine v3.0 244
AutoFact: DNA ligase n=2 Tax=Selaginella moellendorffii RepID=D8SJP8_SELML 4.0e-28
FL-Next: sp=DNA ligase 4; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: DNA ligase 6.707e-10
Internal
sp_v3.0_unigene64107 SustainPine v3.0 209
AutoFact: Os02g0494700 protein n=2 Tax=Oryza sativa RepID=Q0E138_ORYSJ 5.0e-21
FL-Next: sp=Transcriptional activator DEMETER; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Repressor of silencing 1 2.159e-08
Internal
sp_v3.0_unigene64622 SustainPine v3.0 265
AutoFact: Syntaxin, plant, putative n=1 Tax=Ricinus communis RepID=B9S229_RICCO 3.0e-23
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Qa-SNARE, SYP2/Pep12p/Syntaxin 7-type 2.487e-12
Internal
sp_v3.0_unigene64884 SustainPine v3.0 151
AutoFact: DNA ligase (Fragment) n=2 Tax=Vitis vinifera RepID=D7SQI2_VITVI 5.0e-11
FL-Next: sp=DNA ligase 4; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: DNA ligase 5.912e-07
Internal
sp_v3.0_unigene65115 SustainPine v3.0 227
AutoFact: Isoform 2 of Transcriptional activator DEMETER n=1 Tax=Arabidopsis thaliana RepID=Q8LK56-2 6.0e-14
FL-Next: Isoform 2 of Transcriptional activator DEMETER OS=Arabidopsis thaliana GN=DME 0.0
Sma3: Repressor of silencing 1 6.042e-09
Internal
sp_v3.0_unigene65568 SustainPine v3.0 222
AutoFact: Putative histone H1 n=2 Tax=Pinaceae RepID=Q84L42_PINPS 4.0e-24
FL-Next: tr=Putative histone H1; Pinus pinaster (Maritime pine). 0.0
Sma3: Histone H1 1.908e-22
Internal
sp_v3.0_unigene65977 SustainPine v3.0 336
AutoFact: DNA-binding protein n=1 Tax=Zea mays RepID=B6TYB6_MAIZE 5.0e-05
FL-Next: tr=DNA-binding protein; Zea mays (Maize). 0.0
Sma3: DNA-binding protein-like 6.269e-20
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain