Sustainpine_db
HomeAssembliesBLASTSearchInstitutions

Assembly Name: SustainPine v3.0

Name: AT hook, DNA-binding motif

Term: IPR017956  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene48078 SustainPine v3.0 402
AutoFact: Repressor of silencing 3 n=1 Tax=Nicotiana tabacum RepID=A4PF91_TOBAC 1.0e-22
FL-Next: Isoform 1 of Transcriptional activator DEMETER OS=Arabidopsis thaliana GN=DME 0.0
Sma3: Repressor of silencing 1 1.408e-08
Internal
sp_v3.0_unigene48593 SustainPine v3.0 448
AutoFact: PHD finger transcription factor-like protein [Oryza sativa Japonica Group] 3.0e-28
FL-Next: sp=Methyl-CpG-binding domain-containing protein 9; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene49451 SustainPine v3.0 1044
AutoFact: AT-hook DNA-binding protein n=1 Tax=Catharanthus roseus RepID=A1DR80_CATRO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: DNA-binding protein-like 6.77e-26
N-terminus
sp_v3.0_unigene49588 SustainPine v3.0 1527
AutoFact: Histone-lysine n-methyltransferase, suvh, putative n=1 Tax=Ricinus communis RepID=B9SHW2_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: SET domain protein 8.329e-20
Putative N-terminus
sp_v3.0_unigene50138 SustainPine v3.0 284
AutoFact: WRC, zf-4CXXC-R1 transcription factor and jumonji domain-containing protein [Arabidopsis thaliana] gb|AEE28390.1| WRC, zf-4CXXC-R1 transcription factor and jumonji domain-containing protein [Arabidopsis thaliana] 4.0e-19
FL-Next: tr=Lysine-specific demethylase 3A-B; Medicago truncatula (Barrel medic) (Medicago tribuloides). 0.0
Internal
sp_v3.0_unigene50346 SustainPine v3.0 149
AutoFact: Unassigned protein
FL-Next: tr=Lysine-specific demethylase 3A-B; Medicago truncatula (Barrel medic) (Medicago tribuloides). 0.0
Sma3: ENBP1 protein 2.868e-08
Internal
sp_v3.0_unigene50755 SustainPine v3.0 198
AutoFact: zf-4CXXC_R1 domain containing protein 2.0e-05
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Putative N-terminus
sp_v3.0_unigene50942 SustainPine v3.0 1163
AutoFact: Transcription factor, putative n=1 Tax=Ricinus communis RepID=B9RSE9_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: ENBP1 protein 4.629e-08
Complete
sp_v3.0_unigene50970 SustainPine v3.0 407
AutoFact: Unassigned protein
FL-Next: tr=Transcription factor jumonji domain-containing protein; Arabidopsis lyrata subsp. lyrata (Lyre-leaved rock-cress). 0.0
Sma3: ENBP1 protein 3.603e-08
Internal
sp_v3.0_unigene51208 SustainPine v3.0 343
AutoFact: DNA ligase 4 n=2 Tax=Arabidopsis RepID=DNLI4_ARATH 4.99997e-41
FL-Next: sp=DNA ligase 4; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: DNA ligase 6.707e-10
Internal
sp_v3.0_unigene51690 SustainPine v3.0 487
AutoFact: [V] COG0534 Na+-driven multidrug efflux pump 8.0e-12
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Multidrug resistance pump, putative 0.0
Internal
sp_v3.0_unigene51874 SustainPine v3.0 391
AutoFact: ATP binding protein, putative n=1 Tax=Ricinus communis RepID=B9R995_RICCO 1.0e-18
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ankyrin protein kinase-like 3.616e-15
Internal
sp_v3.0_unigene52012 SustainPine v3.0 212
AutoFact: Repressor of silencing 1 n=1 Tax=Nicotiana tabacum RepID=A4PF88_TOBAC 8.0e-30
FL-Next: Isoform 2 of Transcriptional activator DEMETER OS=Arabidopsis thaliana GN=DME 0.0
Sma3: Repressor of silencing 1 1.712e-08
Internal
sp_v3.0_unigene52032 SustainPine v3.0 371
AutoFact: Nuclear receptor binding set domain containing protein 1, nsd, putative n=1 Tax=Ricinus communis RepID=B9T6E1_RICCO 2.0e-20
FL-Next: sp=Zinc finger CCCH domain-containing protein 19; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene52336 SustainPine v3.0 220
AutoFact: DNA binding protein, putative n=1 Tax=Ricinus communis RepID=B9S1G5_RICCO 3.0e-11
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: AT-hook protein 1 1.721e-08
Internal
sp_v3.0_unigene52456 SustainPine v3.0 330
AutoFact: Alba DNA/RNA-binding protein [Arabidopsis thaliana] gb|AAL06555.1|AF412102_1 At1g76010/T4O12_22 [Arabidopsis thaliana] gb|AAL16210.1|AF428441_1 At1g76010/T4O12_22 [Arabidopsis thaliana] gb|AAL06869.1| At1g76010/T4O12_22 [Arabidopsis thaliana] gb|AAM70556. 2.0e-25
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ribonuclease P 2.532e-08
Internal
sp_v3.0_unigene52500 SustainPine v3.0 353
AutoFact: Unassigned protein 2.0e-08
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene53064 SustainPine v3.0 356
AutoFact: histone-like protein [Fritillaria liliacea] 2.0e-06
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Histone H1 1.813e-26
Putative N-terminus
sp_v3.0_unigene53275 SustainPine v3.0 229
AutoFact: DNA ligase n=1 Tax=Populus nigra RepID=Q0PCF8_POPNI 6.0e-31
FL-Next: sp=Putative DNA ligase 4; Oryza sativa subsp. japonica (Rice). 0.0
Sma3: DNA ligase 6.707e-10
Internal
sp_v3.0_unigene53564 SustainPine v3.0 179
AutoFact: JmjC domain containing protein 5.0e-10
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: ENBP1 protein 4.484e-08
Putative N-terminus

Go to Annotations List

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain