Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: AT hook, DNA-binding motif

Term: IPR017956  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene32211 SustainPine v3.0 1082
AutoFact: AT-hook DNA-binding protein n=1 Tax=Catharanthus roseus RepID=A1DR80_CATRO 0.0
FL-Next: tr=AT-hook DNA-binding protein; Catharanthus roseus (Madagascar periwinkle) (Vinca rosea). 0.0
Sma3: DNA-binding protein-like 1.414e-19
Complete
sp_v3.0_unigene32422 SustainPine v3.0 2906
AutoFact: Protein regulator of cytokinesis, putative n=1 Tax=Ricinus communis RepID=B9RHR0_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Microtubule-associated protein MAP65-1a 7.389e-27
Complete
sp_v3.0_unigene32478 SustainPine v3.0 560
AutoFact: Putative histone H1 n=2 Tax=Pinaceae RepID=Q84L42_PINPS 1.0e-25
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Histone H1 6.06e-09
N-terminus
sp_v3.0_unigene34117 SustainPine v3.0 1204
AutoFact: AT hook motif-containing protein [Arabidopsis thaliana] dbj|BAH20420.1| AT5G54930 [Arabidopsis thaliana] gb|AED96559.1| AT hook motif-containing protein [Arabidopsis thaliana] 7.0e-13
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative uncharacterized protein 0.0
N-terminus
sp_v3.0_unigene34193 SustainPine v3.0 1138
AutoFact: Putative histone H1 n=2 Tax=Pinaceae RepID=Q84L42_PINPS 7.0e-22
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Histone H1 0.0
Complete
sp_v3.0_unigene35264 SustainPine v3.0 415
AutoFact: microtubule-associated protein MAP65-1a [Nicotiana tabacum] 1.0e-20
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Microtubule-associated protein MAP65-1a 2.314e-27
N-terminus
sp_v3.0_unigene36070 SustainPine v3.0 909
AutoFact: AT-hook DNA-binding protein [Catharanthus roseus] 4.00001e-40
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: AT-hook DNA-binding protein 6.453e-18
C-terminus
sp_v3.0_unigene36138 SustainPine v3.0 767
AutoFact: ATP binding protein, putative n=1 Tax=Ricinus communis RepID=B9RYZ7_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: ATP binding protein, putative 7.033e-22
Internal
sp_v3.0_unigene36647 SustainPine v3.0 1175
AutoFact: Putative histone H1 n=2 Tax=Pinaceae RepID=Q84L42_PINPS 2.0e-23
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Histone H1 0.0
Complete
sp_v3.0_unigene36693 SustainPine v3.0 1205
AutoFact: putative histone H1 [Cryptomeria japonica] 6.0e-18
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Histone H1 1.688e-08
Putative Complete
sp_v3.0_unigene37219 SustainPine v3.0 1518
AutoFact: protein TRANSPARENT TESTA 12 [Arabidopsis thaliana] sp|Q9LYT3.1|TT12_ARATH RecName: Full=Protein TRANSPARENT TESTA 12; AltName: Full=MATE efflux family protein TT12; AltName: Full=Protein DTX41 emb|CAB86931.1| putative protein [Arabidopsis thaliana] emb|C 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Multidrug resistance pump, putative 2.38221e-42
C-terminus
sp_v3.0_unigene37408 SustainPine v3.0 2921
AutoFact: PLE, putative n=1 Tax=Ricinus communis RepID=B9S7E4_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Microtubule-associated protein MAP65-1a 6.11e-27
Complete
sp_v3.0_unigene37471 SustainPine v3.0 521
AutoFact: Transcription factor jumonji (jmjC) domain-containing protein [Arabidopsis thaliana] gb|AAL60025.1| unknown protein [Arabidopsis thaliana] gb|AAM20342.1| unknown protein [Arabidopsis thaliana] gb|AEE81964.1| Transcription factor jumonji (jmjC) domain-cont 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Sma3: Putative uncharacterized protein At3g07610 4.588e-08
Internal
sp_v3.0_unigene37598 SustainPine v3.0 1693
AutoFact: syntaxin [Glycine max] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Qa-SNARE, SYP2/Pep12p/Syntaxin 7-type 3.864e-12
Complete
sp_v3.0_unigene37691 SustainPine v3.0 1622
AutoFact: Alba multi-domain protein 7.0e-17
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ribonuclease P 2.532e-08
Complete
sp_v3.0_unigene37806 SustainPine v3.0 1910
AutoFact: AT hook motif DNA-binding family protein [Arabidopsis thaliana] ref|NP_850215.1| AT hook motif DNA-binding family protein [Arabidopsis thaliana] ref|NP_973590.1| AT hook motif DNA-binding family protein [Arabidopsis thaliana] ref|NP_001118437.1| AT hook m 9.94922e-44
FL-Next: sp=Putative DNA-binding protein ESCAROLA; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: AT-hook protein 1 1.039e-18
Complete
sp_v3.0_unigene38061 SustainPine v3.0 412
AutoFact: protease Do-like 9 [Arabidopsis thaliana] sp|Q9FL12.1|DEGP9_ARATH RecName: Full=Protease Do-like 9 dbj|BAB10901.1| serine protease-like protein [Arabidopsis thaliana] gb|AAK76697.1| putative DegP protease [Arabidopsis thaliana] gb|AAN13177.1| putative Deg 1.0e-05
FL-Next: sp=Protease Do-like 9; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Serine endopeptidase degp2, putative 1.279e-13
C-terminus
sp_v3.0_unigene38685 SustainPine v3.0 1211
AutoFact: Putative histone H1 n=2 Tax=Pinaceae RepID=Q84L42_PINPS 3.0e-24
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Histone H1 0.0
Complete
sp_v3.0_unigene38775 SustainPine v3.0 400
AutoFact: Unassigned protein 2.0e-07
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene38938 SustainPine v3.0 545
AutoFact: DNA ligase n=1 Tax=Populus nigra RepID=Q0PCF8_POPNI 0.0
FL-Next: sp=DNA ligase 4; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: DNA ligase 7.815e-10
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain