Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: AT hook, DNA-binding motif

Term: IPR017956  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene18229 SustainPine v3.0 1415
AutoFact: Putative histone H1 n=2 Tax=Pinaceae RepID=Q84L42_PINPS 3.0e-27
FL-Next: tr=Putative histone H1; Pinus pinaster (Maritime pine). 0.0
Sma3: Histone H1 0.0
Complete
sp_v3.0_unigene18260 SustainPine v3.0 802
AutoFact: putative DegP2 protease [Oryza sativa Japonica Group] 2.0e-27
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Serine endopeptidase degp2, putative 6.15e-13
Putative C-terminus
sp_v3.0_unigene18834 SustainPine v3.0 635
AutoFact: Androgen induced inhibitor of proliferation (As3) / pds5, putative n=1 Tax=Ricinus communis RepID=B9T579_RICCO 1.0e-16
FL-Next: sp=DNA mismatch repair protein MSH6; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: cDNA clone:J023074F05, full insert sequence 9.26e-06
Internal
sp_v3.0_unigene19250 SustainPine v3.0 474
AutoFact: chaperone DnaJ-domain containing protein [Arabidopsis thaliana] ref|NP_851102.1| chaperone DnaJ-domain containing protein [Arabidopsis thaliana] ref|NP_001078673.1| chaperone DnaJ-domain containing protein [Arabidopsis thaliana] ref|NP_001119323.1| chaper 2.0e-30
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene20355 SustainPine v3.0 1331
AutoFact: Putative histone H1 n=1 Tax=Cryptomeria japonica RepID=Q1XG59_CRYJA 1.0e-25
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Histone H1 0.0
Complete
sp_v3.0_unigene21489 SustainPine v3.0 882
AutoFact: Putative histone H1 n=2 Tax=Pinaceae RepID=Q84L42_PINPS 8.0e-25
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Histone H1 0.0
Complete
sp_v3.0_unigene22800 SustainPine v3.0 955
AutoFact: Putative ripening regulated protein [Oryza sativa Japonica Group] gb|ABF94378.1| MatE family protein, expressed [Oryza sativa Japonica Group] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Multidrug resistance pump, putative 0.0
C-terminus
sp_v3.0_unigene23272 SustainPine v3.0 937
AutoFact: AP2/B3 domain-containing transcription factor [Arabidopsis thaliana] sp|Q1G3M3.1|Y3918_ARATH RecName: Full=B3 domain-containing protein At3g19184 gb|ABF59230.1| unknown protein [Arabidopsis thaliana] dbj|BAH30459.1| hypothetical protein [Arabidopsis thali 8.99998e-41
FL-Next: sp=B3 domain-containing protein Os05g0481400; Oryza sativa subsp. japonica (Rice). 0.0
N-terminus
sp_v3.0_unigene23340 SustainPine v3.0 880
AutoFact: DNA binding protein, putative n=1 Tax=Ricinus communis RepID=B9STJ6_RICCO 4.06377e-44
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: ESC, putative 2.932e-15
C-terminus
sp_v3.0_unigene23968 SustainPine v3.0 1596
AutoFact: AT-hook DNA-binding protein [Gossypium hirsutum] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: DNA binding protein, putative 1.033e-20
Complete
sp_v3.0_unigene24692 SustainPine v3.0 1463
AutoFact: putative transcriptional regulator [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: SWR1 complex protein, SNF2 family DNA-dependent ATPase 2.319e-08
C-terminus
sp_v3.0_unigene24946 SustainPine v3.0 4049
AutoFact: JmjC multi-domain protein 2.0e-12
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: ENBP1 protein 2.819e-08
Complete
sp_v3.0_unigene25195 SustainPine v3.0 634
AutoFact: HEAT n=1 Tax=Medicago truncatula RepID=A2Q1R4_MEDTR 5.0e-22
FL-Next: sp=DNA mismatch repair protein MSH6; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Gb|AAF07790.1 3.411e-06
Internal
sp_v3.0_unigene26602 SustainPine v3.0 2676
AutoFact: methyl-CPG-binding domain 8 [Arabidopsis thaliana] sp|Q9LME6.1|MBD8_ARATH RecName: Full=Methyl-CpG-binding domain-containing protein 8; Short=AtMBD8; Short=MBD08; AltName: Full=Methyl-CpG-binding protein MBD8 gb|AAF87260.1|AC068562_7 Contains a Methyl-CpG 5.0e-29
FL-Next: sp=Methyl-CpG-binding domain-containing protein 8; Arabidopsis thaliana (Mouse-ear cress). 0.0
Putative Complete
sp_v3.0_unigene28161 SustainPine v3.0 1594
AutoFact: homeobox protein HAT3.1 [Arabidopsis thaliana] sp|Q04996.3|HAT31_ARATH RecName: Full=Homeobox protein HAT3.1 dbj|BAC41784.1| putative homeobox protein HAT3.1 [Arabidopsis thaliana] gb|AAO64900.1| At3g19510 [Arabidopsis thaliana] gb|AEE76250.1| homeobox pr 0.0
FL-Next: sp=Homeobox protein HAT3.1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Pathogenesis-related homeodomain protein 1.514e-08
N-terminus
sp_v3.0_unigene28431 SustainPine v3.0 760
AutoFact: putative MATE family protein [Oryza sativa Japonica Group] gb|EEE59381.1| hypothetical protein OsJ_11497 [Oryza sativa Japonica Group] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Multidrug resistance pump, putative 0.0
Putative C-terminus
sp_v3.0_unigene29272 SustainPine v3.0 729
AutoFact: pfam00271, Helicase_C, Helicase conserved C-terminal domain 6.0e-20
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Chromatin remodeling complex subunit 1.359e-29
Putative C-terminus
sp_v3.0_unigene29308 SustainPine v3.0 599
AutoFact: mate efflux domain-containing protein [Arabidopsis thaliana] gb|AAK53040.1|AF375456_1 AT5g65380/MNA5_11 [Arabidopsis thaliana] dbj|BAB11560.1| unnamed protein product [Arabidopsis thaliana] gb|AAN28899.1| At5g65380/MNA5_11 [Arabidopsis thaliana] gb|AED980 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Multidrug resistance pump, putative 0.0
Internal
sp_v3.0_unigene30224 SustainPine v3.0 825
AutoFact: Unassigned protein
FL-Next: tr=Uncharacterized protein; Oryza glaberrima (African rice). 0.0
Sma3: Putative uncharacterized protein At3g07610 4.714e-08
Internal
sp_v3.0_unigene31600 SustainPine v3.0 1084
AutoFact: Putative histone H1 n=2 Tax=Pinaceae RepID=Q84L42_PINPS 1.0e-24
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Histone H1 0.0
Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain