Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: AT hook, DNA-binding motif

Term: IPR017956  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene7789 SustainPine v3.0 1230
AutoFact: Trithorax, putative n=1 Tax=Ricinus communis RepID=B9RII0_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: SET domain protein 1.305e-12
Putative Complete
sp_v3.0_unigene7921 SustainPine v3.0 576
unknown
sp_v3.0_unigene8033 SustainPine v3.0 1027
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Sma3: Putative uncharacterized protein At3g07610 3.208e-08
Internal
sp_v3.0_unigene8058 SustainPine v3.0 1484
AutoFact: putative formamidopyrimidine-DNA glycosylase 1 [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Sma3: Putative formamidopyrimidine-DNA glycosylase 1 9.264e-09
N-terminus
sp_v3.0_unigene8072 SustainPine v3.0 2908
AutoFact: Protein ariadne-1, putative n=1 Tax=Ricinus communis RepID=B9RZD6_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: IBR domain containing protein, expressed 8.941e-08
C-terminus
sp_v3.0_unigene8141 SustainPine v3.0 1629
AutoFact: Os06g0130100 protein n=4 Tax=Oryza sativa RepID=Q7XB99_ORYSJ 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Histone H1 6.355e-12
Complete
sp_v3.0_unigene8145 SustainPine v3.0 3132
AutoFact: Bromodomain n=1 Tax=Medicago truncatula RepID=Q1SKV9_MEDTR 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Bromodomain protein 6.009e-08
Complete
sp_v3.0_unigene8161 SustainPine v3.0 2820
AutoFact: Unassigned protein
FL-Next: tr=DNA binding protein, putative; Ricinus communis (Castor bean). 0.0
Sma3: Chromosome chr13 scaffold_210, whole genome shotgun sequence 1.873e-07
Putative Complete
sp_v3.0_unigene8482 SustainPine v3.0 2593
AutoFact: Protein regulator of cytokinesis, putative n=1 Tax=Ricinus communis RepID=B9SYY2_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Microtubule-associated protein MAP65-1a 4.441e-27
Complete
sp_v3.0_unigene8984 SustainPine v3.0 636
AutoFact: DNA glycosylase (Fragment) n=1 Tax=Populus trichocarpa RepID=B9MTP0_POPTR 0.0
FL-Next: Isoform 2 of Transcriptional activator DEMETER OS=Arabidopsis thaliana GN=DME 0.0
Sma3: Repressor of silencing 1 1.385e-08
C-terminus
sp_v3.0_unigene9566 SustainPine v3.0 636
AutoFact: DNA ligase (Fragment) n=2 Tax=Vitis vinifera RepID=D7SQI2_VITVI 0.0
FL-Next: sp=DNA ligase 4; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: DNA ligase 6.943e-10
Internal
sp_v3.0_unigene9694 SustainPine v3.0 2046
AutoFact: DNA binding protein, putative n=1 Tax=Ricinus communis RepID=B9RDQ4_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene10362 SustainPine v3.0 2273
AutoFact: Protein RCC2, putative n=1 Tax=Ricinus communis RepID=B9R853_RICCO 0.0
FL-Next: tr=Protein RCC2, putative; Ricinus communis (Castor bean). 0.0
Complete
sp_v3.0_unigene10685 SustainPine v3.0 930
AutoFact: ESC, putative n=1 Tax=Ricinus communis RepID=B9RDE5_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: DNA-binding protein-like 7.494e-23
Complete
sp_v3.0_unigene10695 SustainPine v3.0 519
AutoFact: Protein regulator of cytokinesis, putative n=1 Tax=Ricinus communis RepID=B9RHR0_RICCO 1.0e-14
FL-Next: tr=Protein regulator of cytokinesis, putative; Ricinus communis (Castor bean). 0.0
Internal
sp_v3.0_unigene11137 SustainPine v3.0 778
AutoFact: ripening regulated protein DDTFR18 [Solanum lycopersicum] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Multidrug resistance pump, putative 0.0
Internal
sp_v3.0_unigene11152 SustainPine v3.0 637
AutoFact: Alba multi-domain protein 6.0e-19
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ribonuclease P 2.452e-08
N-terminus
sp_v3.0_unigene11629 SustainPine v3.0 1811
AutoFact: AT-hook DNA-binding protein [Catharanthus roseus] 4.0e-30
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: DNA-binding protein-like 1.152e-22
Putative Complete
sp_v3.0_unigene11896 SustainPine v3.0 2016
AutoFact: AT hook motif DNA-binding family protein [Arabidopsis thaliana] ref|NP_850215.1| AT hook motif DNA-binding family protein [Arabidopsis thaliana] ref|NP_973590.1| AT hook motif DNA-binding family protein [Arabidopsis thaliana] ref|NP_001118437.1| AT hook m 8.40779e-45
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: AT-hook protein 1 4.517e-18
Complete
sp_v3.0_unigene11976 SustainPine v3.0 720
AutoFact: Integral membrane protein, putative n=4 Tax=Brassicaceae RepID=Q8LPI3_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Multidrug resistance pump, putative 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain