Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: AT hook, DNA-binding motif

Term: IPR017956  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene143404 SustainPine v3.0 287
• AutoFact: putative DegP2 protease [Oryza sativa Japonica Group] 2.0e-30
• FL-Next: sp=Protease Do-like 9; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: Serine endopeptidase degp2, putative 1.966e-16
Internal
sp_v3.0_unigene144764 SustainPine v3.0 1073
• AutoFact: Putative histone H1 n=2 Tax=Pinaceae RepID=Q84L42_PINPS 1.0e-24
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Histone H1 0.0
Complete
sp_v3.0_unigene144818 SustainPine v3.0 608
• AutoFact: Putative histone H1 n=2 Tax=Pinaceae RepID=Q84L42_PINPS 3.0e-22
• FL-Next: tr=Putative histone H1; Pinus pinaster (Maritime pine). 0.0
• Sma3: Histone H1 0.0
Internal
sp_v3.0_unigene145137 SustainPine v3.0 765
• AutoFact: Histone H1-II n=2 Tax=Volvox carteri RepID=H12_VOLCA 2.0e-06
• FL-Next: sp=Histone H1-II; Volvox carteri (Green alga). 0.0
• Sma3: Histone H1 2.27403e-41
Complete
sp_v3.0_unigene145302 SustainPine v3.0 699
• AutoFact: Histone H1-like protein (Fragment) n=15 Tax=Picea sitchensis RepID=E0ZG68_PICSI 2.0e-24
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Histone H1 0.0
N-terminus
sp_v3.0_unigene145524 SustainPine v3.0 524
• AutoFact: Histone H1 linker n=1 Tax=Physcomitrella patens subsp. patens RepID=A9RX26_PHYPA 5.0e-08
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Histone H1 8.016e-27
Complete
sp_v3.0_unigene145714 SustainPine v3.0 926
• AutoFact: Histone H1 linker n=1 Tax=Physcomitrella patens subsp. patens RepID=A9RX26_PHYPA 2.0e-29
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Histone H1 2.24208e-44
Complete
sp_v3.0_unigene145818 SustainPine v3.0 499
• AutoFact: Putative histone H1 n=2 Tax=Pinaceae RepID=Q84L42_PINPS 9.0e-27
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Histone H1 0.0
N-terminus
sp_v3.0_unigene145946 SustainPine v3.0 429
• AutoFact: Putative histone H1 n=1 Tax=Cryptomeria japonica RepID=Q1XG59_CRYJA 6.0e-23
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Histone H1 1.396e-35
N-terminus
sp_v3.0_unigene148201 SustainPine v3.0 280
• AutoFact: GYF domain containing protein 2.0e-11
• FL-Next: sp=Zinc finger CCCH domain-containing protein 19; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene148734 SustainPine v3.0 337
• AutoFact: DUF296 domain containing protein 6.0e-12
• FL-Next: sp=Putative DNA-binding protein ESCAROLA; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: AT-hook DNA-binding protein 4.252e-14
Putative C-terminus
sp_v3.0_unigene149327 SustainPine v3.0 333
• AutoFact: Transcription factor jumonji (jmjC) domain-containing protein [Arabidopsis thaliana] gb|AAL60025.1| unknown protein [Arabidopsis thaliana] gb|AAM20342.1| unknown protein [Arabidopsis thaliana] gb|AEE81964.1| Transcription factor jumonji (jmjC) domain-cont 2.99878e-43
• FL-Next: tr=Putative uncharacterized protein At4g00990; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: ENBP1 protein 3.603e-08
Internal
sp_v3.0_unigene149954 SustainPine v3.0 285
• AutoFact: Os02g0109400 protein n=1 Tax=Oryza sativa Japonica Group RepID=Q0E4N0_ORYSJ 1.0e-38
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: ENBP1 protein 4.609e-08
N-terminus
sp_v3.0_unigene159898 SustainPine v3.0 206
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
• Sma3: ENBP1 protein 6.118e-09
Internal
sp_v3.0_unigene160905 SustainPine v3.0 481
• AutoFact: ESC, putative n=1 Tax=Ricinus communis RepID=B9RDE5_RICCO 2.0e-28
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: DNA-binding protein-like 5.413e-26
Internal
sp_v3.0_unigene161923 SustainPine v3.0 362
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: AT-hook DNA-binding protein 8.835e-08
Putative N-terminus
sp_v3.0_unigene162964 SustainPine v3.0 397
• AutoFact: mate efflux domain-containing protein [Arabidopsis thaliana] gb|AAK53040.1|AF375456_1 AT5g65380/MNA5_11 [Arabidopsis thaliana] dbj|BAB11560.1| unnamed protein product [Arabidopsis thaliana] gb|AAN28899.1| At5g65380/MNA5_11 [Arabidopsis thaliana] gb|AED980 3.0e-39
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Multidrug resistance pump, putative 0.0
C-terminus
sp_v3.0_unigene165106 SustainPine v3.0 164
• AutoFact: Transcription factor, putative n=1 Tax=Ricinus communis RepID=B9RSE9_RICCO 5.0e-14
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: ENBP1 protein 2.046e-08
Putative N-terminus
sp_v3.0_unigene165848 SustainPine v3.0 258
• AutoFact: Transcription factor jumonji domain-containing protein n=2 Tax=Arabidopsis RepID=D7KN75_ARALL 1.0e-27
• FL-Next: tr=Transcription factor jumonji domain-containing protein; Arabidopsis lyrata subsp. lyrata (Lyre-leaved rock-cress). 0.0
• Sma3: ENBP1 protein 3.421e-08
Internal
sp_v3.0_unigene166748 SustainPine v3.0 366
• AutoFact: Homeobox protein HAT3.1, putative n=1 Tax=Ricinus communis RepID=B9SN98_RICCO 8.0e-32
• FL-Next: sp=Homeobox protein HAT3.1; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: Pathogenesis-related homeodomain protein 1.514e-08
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain