Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: RNA polymerase Rpb7, N-terminal

Term: IPR005576  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene146074 SustainPine v3.0 684
AutoFact: RecName: Full=S-adenosylmethionine synthase 2; Short=AdoMet synthase 2; AltName: Full=Methionine adenosyltransferase 2; Short=MAT 2 gb|AAA33274.1| S-adenosylmethionine synthetase [Dianthus caryophyllus] prf||1802406A Met(S-adenosyl) synthetase 9.80909e-45
FL-Next: sp=S-adenosylmethionine synthase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Methionine S-adenosyl transferase 4.056e-36
N-terminus
sp_v3.0_unigene146330 SustainPine v3.0 499
AutoFact: S-adenosylmethionine synthase 1 n=12 Tax=Spermatophyta RepID=METK1_HORVU 0.0
FL-Next: sp=S-adenosylmethionine synthase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Methionine S-adenosyl transferase 1.19e-35
Internal
sp_v3.0_unigene146649 SustainPine v3.0 573
AutoFact: S-adenosylmethionine synthase 1 n=12 Tax=Spermatophyta RepID=METK1_HORVU 0.0
FL-Next: sp=S-adenosylmethionine synthase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: S-adenosylmethionine synthetase 2.125e-30
Internal
sp_v3.0_unigene146722 SustainPine v3.0 789
AutoFact: S-adenosylmethionine synthase 1 n=12 Tax=Spermatophyta RepID=METK1_HORVU 0.0
FL-Next: sp=S-adenosylmethionine synthase 2; Pinus contorta (Shore pine) (Lodgepole pine). 0.0
Sma3: S-adenosylmethionine synthetase 4.872e-30
N-terminus
sp_v3.0_unigene146746 SustainPine v3.0 820
AutoFact: S-adenosylmethionine synthase 1 n=12 Tax=Spermatophyta RepID=METK1_HORVU 0.0
FL-Next: sp=S-adenosylmethionine synthase 2; Pinus contorta (Shore pine) (Lodgepole pine). 0.0
Sma3: Methionine S-adenosyl transferase 4.512e-36
Internal
sp_v3.0_unigene146756 SustainPine v3.0 267
AutoFact: S-adenosylmethionine synthetase (Fragment) n=1 Tax=Dendrobium hybrid cultivar RepID=A4GKJ0_9ASPA 1.00053e-42
FL-Next: sp=S-adenosylmethionine synthase; Pinus pinaster (Maritime pine). 0.0
Sma3: Methionine S-adenosyl transferase 1.736e-35
Internal
sp_v3.0_unigene146876 SustainPine v3.0 942
AutoFact: S-adenosylmethionine synthase 3 n=6 Tax=Embryophyta RepID=METK3_ARATH 0.0
FL-Next: sp=S-adenosylmethionine synthase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Methionine S-adenosyl transferase 1.386e-35
C-terminus
sp_v3.0_unigene146901 SustainPine v3.0 670
AutoFact: S-adenosylmethionine synthase 1 n=12 Tax=Spermatophyta RepID=METK1_HORVU 0.0
FL-Next: sp=S-adenosylmethionine synthase 3; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Methionine S-adenosyl transferase 7.119e-36
Internal
sp_v3.0_unigene146916 SustainPine v3.0 441
AutoFact: S-adenosylmethionine synthetase (Fragment) n=1 Tax=Dendrobium hybrid cultivar RepID=A4GKJ0_9ASPA 0.0
FL-Next: sp=S-adenosylmethionine synthase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Methionine S-adenosyl transferase 1.285e-35
Internal
sp_v3.0_unigene146970 SustainPine v3.0 657
AutoFact: S-adenosylmethionine synthase (Fragment) n=1 Tax=Vitis vinifera RepID=D7TIR8_VITVI 0.0
FL-Next: sp=S-adenosylmethionine synthase 2; Pinus contorta (Shore pine) (Lodgepole pine). 0.0
Sma3: Methionine S-adenosyl transferase 7.875e-36
Internal
sp_v3.0_unigene147036 SustainPine v3.0 1192
AutoFact: S-adenosylmethionine synthase (Fragment) n=1 Tax=Vitis vinifera RepID=D7TIR8_VITVI 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Methionine S-adenosyl transferase 1.19e-35
C-terminus
sp_v3.0_unigene152014 SustainPine v3.0 549
AutoFact: DNAdirected RNA polymerase II 19 kDa polypeptide pu n=2 Tax=Oomycetes RepID=F0WFZ2_9STRA 0.0
FL-Next: sp=DNA-directed RNA polymerase II subunit RPB7; Glycine max (Soybean) (Glycine hispida). 0.0
Sma3: RNA polymerase II subunit B7 1.86e-09
C-terminus
sp_v3.0_unigene153206 SustainPine v3.0 435
AutoFact: Polymerase n=3 Tax=Chromadorea RepID=E1FRC1_LOALO 9.80909e-45
FL-Next: sp=DNA-directed RNA polymerase II subunit RPB7; Glycine max (Soybean) (Glycine hispida). 0.0
Sma3: RNA polymerase II subunit B7 1.577e-09
N-terminus
sp_v3.0_unigene166743 SustainPine v3.0 258
AutoFact: Kinase, putative n=1 Tax=Ricinus communis RepID=B9SU72_RICCO 3.0e-24
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Kinase, putative 2.846e-10
N-terminus
sp_v3.0_unigene166798 SustainPine v3.0 358
AutoFact: DNA-directed RNA polymerase II subunit [Coprinopsis cinerea okayama7#130] gb|EAU91761.1| DNA-directed RNA polymerase II subunit [Coprinopsis cinerea okayama7#130] 1.0e-29
FL-Next: sp=DNA-directed RNA polymerase II subunit RPB7; Glycine max (Soybean) (Glycine hispida). 0.0
C-terminus
sp_v3.0_unigene168042 SustainPine v3.0 130
AutoFact: Os07g0132500 protein (Fragment) n=4 Tax=Oryza sativa RepID=Q0D8S4_ORYSJ 1.0e-13
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative receptor-type protein kinase LRK1 6.976e-27
Internal
sp_v3.0_unigene189060 SustainPine v3.0 681
AutoFact: RecName: Full=DNA-directed RNA polymerase II subunit RPB7; Short=RNA polymerase II subunit B7 gb|AAA34005.1| RNA polymerase II [Glycine max] gb|ACU13766.1| unknown [Glycine max] 5.0e-07
FL-Next: sp=DNA-directed RNA polymerase II subunit RPB7; Glycine max (Soybean) (Glycine hispida). 0.0
Putative Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain